| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1379 |
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| Symbol | pcaB |
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| ID | 1043939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1571875 |
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| End bp | 1573227 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637144780 |
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| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
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| Protein accession | NP_743538 |
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| Protein GI | 26988113 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.449914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.617034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC AACTGTTCGA CGCCTATTTC ACCGCGCCGG CCATGCGCGA GATTTTCTCC
GACCGAGGCC GCCTGCAGGG CATGCTGGAT TTCGAAGCCG CGCTTGCCCG AGCCGAAGCC
TCTGCCGGTT TGGTCCCGCA CAGCGCGGTA GCGGCCATCG AGGCGGCATG CCAGGCCGAG
CGCTATGACG TTGGCGCGCT GGCCAATGCC ATCGCCACCG CGGGCAACTC GGCCATTCCG
CTGGTGAAAG CGTTGGGCAA GGTGATCGCC ACCGGCGTGC CAGAGGCTGA GCGCTATGTG
CACCTTGGGG CCACCAGCCA GGATGCGATG GATACCGGTC TGGTTCTGCA GCTGCGCGAT
GCCCTCGATT TGATCGAGGC CGACCTCGGC AAGCTGGCCG ATACCCTGTC GCAGCAGGCC
TTGAAGCACG CCGATACGCC CTTGGTGGGT CGTACCTGGT TGCAACACGC CACCCCGGTG
ACCCTGGGCA TGAAACTGGC CGGTGTACTG GGTGCTTTGA CCCGCCACCG TCAGCGCCTG
CAGGAACTGC GCCCGCGCCT TCTGGTCCTG CAGTTCGGCG GTGCCTCGGG CAGCCTGGCG
GCGCTGGGCA GCAAGGCGAT GCCGGTGGCC GAAGCGCTGG CCGAACAGCT CAAGCTGACC
CTGCCCGAGC AGCCCTGGCA CACCCAGCGC GACCGCCTGG TGGAGTTTGC CTCGGTATTG
GGCCTGGTTG CCGGCAGCCT GGGCAAGTTC GGCCGTGATA TCAGCTTGCT GATGCAAACC
GAGGCGGGGG AGGTGTTTGA GCCTTCTGCG CCGGGCAAGG GTGGTTCTTC GACCATGCCA
CACAAGCGCA ACCCGGTGGG TGCCGCCGTG TTGATCGGTG CCGCGACCCG CGTGCCGGGC
CTGCTGTCGA CGCTGTTCGC AGCCATGCCT CAGGAGCACG AACGCAGCCT GGGCCTATGG
CATGCCGAGT GGGAAACCCT GCCGGATATC TGCTGCCTGG TCTCTGGCGC CCTGCGCCAG
GCTCAAGTGA TTGCCGAGGG CATGGAGGTG GATGCCGCGC GCATGCGCCG TAACCTCGAC
CTGACCCAAG GCCTGGTGCT GGCCGAAGCG GTGAGCATCG TCCTCGCCCA GCGTCTGGGT
CGCGACCGTG CCCACCACCT GCTGGAACAA TGCTGCCAAC GCGCGGTGGC CGAACAGCGG
CACCTGCGTG CCGTGCTGGG TGACGAGCCG CAGGTCAGCG CCGAGCTGTC TGGCGAAGAA
CTCGATCGCC TGCTCGACCC TGCCCATTAC CTGGGCCAGG CCCGCGTCTG GGTGGCGCGC
GCCGTGTCCG AACATCAACG TTTCACTGCC TGA
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| Protein sequence | MSNQLFDAYF TAPAMREIFS DRGRLQGMLD FEAALARAEA SAGLVPHSAV AAIEAACQAE
RYDVGALANA IATAGNSAIP LVKALGKVIA TGVPEAERYV HLGATSQDAM DTGLVLQLRD
ALDLIEADLG KLADTLSQQA LKHADTPLVG RTWLQHATPV TLGMKLAGVL GALTRHRQRL
QELRPRLLVL QFGGASGSLA ALGSKAMPVA EALAEQLKLT LPEQPWHTQR DRLVEFASVL
GLVAGSLGKF GRDISLLMQT EAGEVFEPSA PGKGGSSTMP HKRNPVGAAV LIGAATRVPG
LLSTLFAAMP QEHERSLGLW HAEWETLPDI CCLVSGALRQ AQVIAEGMEV DAARMRRNLD
LTQGLVLAEA VSIVLAQRLG RDRAHHLLEQ CCQRAVAEQR HLRAVLGDEP QVSAELSGEE
LDRLLDPAHY LGQARVWVAR AVSEHQRFTA
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