Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1359 |
Symbol | fxsA |
ID | 1041761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1548550 |
End bp | 1549011 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637144760 |
Product | FxsA |
Protein accession | NP_743518 |
Protein GI | 26988093 |
COG category | [R] General function prediction only |
COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00729111 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.184311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCTT TTCTACTGCT GTTTCTGATT TTTCCTGTGC TGGAGCTGTT CGTCTTCGTG AAGGTCAGCG CGGCTATCGG TTTCTTCCCG GCGTTGCTGC TGATCATCGC CAGCTCCGCC CTGGGCGTAT TGGTCATGCG GGTGGCCGGC CTGGCGACTG CATTGCGCGC CCGTGAAAGC CTGCAGCGCG GTGAATTGCC CGCCGAGGAC ATGTTCCAGG GCATGATGCT GGCCGTGGGC GGTGGCCTGT TGTTGCTGCC CGGCTTCATC AGCGACGTGC TGGGTGTGCT GTGCCTGCTG CCATTCACCC GCCGCCTGGC GGCGCGCAAG ATGCGCGAGC GTGCCGAGGC CCAGGCCATG CGCCAGCGTG CATTCCAGGA TGACCCCTTC CAGGCGCAGC CGCGTGATGG CGGCCACCGC CCGAACGTGA TCGAAGGCGA GTACGAGCGC CGCGACAAGT AA
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Protein sequence | MRAFLLLFLI FPVLELFVFV KVSAAIGFFP ALLLIIASSA LGVLVMRVAG LATALRARES LQRGELPAED MFQGMMLAVG GGLLLLPGFI SDVLGVLCLL PFTRRLAARK MRERAEAQAM RQRAFQDDPF QAQPRDGGHR PNVIEGEYER RDK
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