| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1345 |
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| Symbol | secA |
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| ID | 1041726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1532070 |
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| End bp | 1534805 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637144746 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | NP_743504 |
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| Protein GI | 161378135 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.478182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000123273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTTGCGC CTTTGTTAAA AAAACTTTTT GGAAGCAAGA ACGAGCGTGA AGTCAAACGC
ATGCTCAAGA CGGTGAGTAT CGTCAATGCC TTCGAAGAGA AGATGGTGGC CCTCTCCGAC
GAGCAACTGC GGGGCAAGAC TGCAGAGTTC AAGGAACGCC TGGCCAAAGG CGAGACACTG
GACCAGTTGC TGCCCGAAGC CTTCGCCGTG GCCCGCGAGG CCGGCAAGCG CGTAATGGGC
ATGCGCCATT TCGATGTGCA GCTGATTGGC GGCATGACCC TGCACGAGGG TATGATCGCA
GAAATGCGCA CCGGTGAAGG CAAGACCTTG GTCGGTACCT TGGCCGTCTA CCTCAACGCA
TTGTCCGGCA AGGGCGTGCA TGTGGTCACC GTCAACGACT ACCTGGCGCG CCGTGACGCC
AACTGGATGC GCCCGCTGTA CGAGTTCCTC GGTCTGTCGG TCGGTATCGT CTCGGCCTTC
CAGCCGCCGG AAGAAAAGCG CGCCGCCTAT GCAGCCGACA TCACCTACGG CACCAACAAC
GAATTCGGGT TCGACTACCT GCGCGACAAC ATGGCGTTCA GCCAGGACGA GAAGTTCCAG
CGTGAACTTA ACTTCGCCGT GATCGACGAA GTCGACTCCA TCCTCATCGA CGAAGCGCGT
ACCCCGCTGA TCATTTCCGG TCAGGCCGAG GACAGCTCCA AGCTGTACAT CGAGATCAAC
CGCCTGATCC CGCGCCTCAC CCAGCACATC GAAGAGGTCG AAGGCCAGGT CACCCAGGAA
GGCCACTTCA CCATCGACGA GAAGAGTCGC CAGGTGGAGC TGAACGAAGC CGGTCACCAG
TTCATCGAAG AGATGCTGGC CCAGGCGGGC CTGCTGGCTG AAGGCGAGAG CCTGTACTCC
GCGCACAACC TGGGCTTGCT GACACACGTC TACGCCGGTC TTCGTGCACA CAAGCTGTTC
CACCGCAACG TCGAGTACAT CGTCCAGGAC GGCCAGGTTC TGCTGATCGA CGAACACACC
GGCCGTACCA TGCCGGGCCG TCGCCTGTCC GAGGGCCTGC ACCAGGCCAT CGAAGCCAAA
GAGAACCTGA ACATCCAGGC CGAGAGCCAG ACCCTGGCTT CGACCACCTT CCAGAACTAC
TTCCGCCTGT ACACCAAGCT GTCCGGCATG ACCGGTACCG CCGACACCGA AGCATTCGAG
TTCCAGTCGA TCTACGGCCT GAACGTGATG GTCATTCCGC CGAACAAGCC ACTGGCGCGT
AAGGACTACA ACGACCTGGT GTACCTGACC GCTGACGAGA AATACGCCGC GATCATCGCC
GACATCAAGG AAAGCATGAA GCTGGGCCGG CCGGTGCTGG TAGGTACCGC GACCATTGAA
ACTTCCGAGC ACATGTCCAA CCTCCTGAAA AAGGAAGGGA TCGACCACAA GGTGCTCAAC
GCCAAGTATC ACGAGAAGGA AGCCGAGATC ATCGCGCAAG CAGGCGCGCC AGGTGCACTG
ACCATCGCCA CCAACATGGC TGGCCGTGGT ACCGACATCC TGCTTGGCGG TAACTGGGAA
GCCGAAGTGG CAGCCCTGGA AAACCCGACA GCCGAGCAGA TCGCCCAGAT CAAGGCCGAT
TGGCAGAAGC GTCACCAGCA AGTGATCGAG ACGGGTGGCC TGCATGTAAT CGCTTCCGAG
CGCCACGAAT CGCGCCGTAT CGACAACCAG CTGCGCGGCC GCTCCGGTCG TCAGGGCGAC
CCGGGTTCCA GCCGCTTCTA CCTGTCGCTG GAAGACAGCC TGATGCGCAT CTTCGCCTCT
GACCGGGTGA AGAACTTCAT GAAGGCACTG GGCATGCAGT CGGGCGAGGC CATCGAGCAC
CGCATGGTCA CCAACGCTAT CGAGAAAGCC CAGCGCAAGG TCGAAGGCCG CAACTTCGAC
ATTCGTAAGC AATTGCTCGA ATATGACGAC GTCGCCAACG AGCAGCGCAA GGTGATCTAC
CACATGCGCA ACAGCCTGCT GGCCGCCGAG AACATTGGCG ACACCATCGT CGAATTCCGC
AAGGAAGTAC TGGACGCTAC CATCAGCCAG CACATTCCGC CGCAGTCGCT GCCAGAGCAG
TGGGACGTAG CCGGCCTGGA GGCTTCGCTG GCCAGCGATT TCGCCATCAA GTTGCCAATC
CGGCAATGGC TCGACGAGGA CGATCACCTC TACGAAGAGA CCCTGCGCGA GAAGCTGCTG
AGCGAGATCA CCACGGCCTA CACCGAGAAG GAAGACCAGG CCGGTCTCGA GGCCTTGCGA
ACCTTCGAGA AGCAGATTCT GTTGCGCGTA CTGGACGACC TGTGGAAAGA CCACCTGTCG
ACCATGGACC ACCTGCGTCA CGGTATTCAC CTGCGTGGTT ATGCGCAGAA GAACCCGAAG
CAGGAGTACA AGCGCGAGTC GTTCAGCCTG TTCCAGGAGC TGTTGGAGTC GATCAAGCGC
GACACCATCC GTGTGCTGTC GCACGTACAG GTTCGCCGCG AAGACCCGGC CGAAGAAGAA
GCTCGCCTGC GCCGCGAGGC CGAAGAGCTG GCGAGTCGCA TGCAGTTCCA GCACGCCGCT
GCACCGGGCC TGGGAAGCGA GCAACTGAGC GAGGAGGGTG CCGAAGTAGC GGTAGCCTCG
GCGCCAGTAC GCAATGACCA GAAGCTGGGC CGCAACGAGC CGTGCTGGTG TGGTTCGGGC
AAGAAGTTCA AGCATTGCCA CGGTCAGATC GAGTGA
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| Protein sequence | MFAPLLKKLF GSKNEREVKR MLKTVSIVNA FEEKMVALSD EQLRGKTAEF KERLAKGETL
DQLLPEAFAV AREAGKRVMG MRHFDVQLIG GMTLHEGMIA EMRTGEGKTL VGTLAVYLNA
LSGKGVHVVT VNDYLARRDA NWMRPLYEFL GLSVGIVSAF QPPEEKRAAY AADITYGTNN
EFGFDYLRDN MAFSQDEKFQ RELNFAVIDE VDSILIDEAR TPLIISGQAE DSSKLYIEIN
RLIPRLTQHI EEVEGQVTQE GHFTIDEKSR QVELNEAGHQ FIEEMLAQAG LLAEGESLYS
AHNLGLLTHV YAGLRAHKLF HRNVEYIVQD GQVLLIDEHT GRTMPGRRLS EGLHQAIEAK
ENLNIQAESQ TLASTTFQNY FRLYTKLSGM TGTADTEAFE FQSIYGLNVM VIPPNKPLAR
KDYNDLVYLT ADEKYAAIIA DIKESMKLGR PVLVGTATIE TSEHMSNLLK KEGIDHKVLN
AKYHEKEAEI IAQAGAPGAL TIATNMAGRG TDILLGGNWE AEVAALENPT AEQIAQIKAD
WQKRHQQVIE TGGLHVIASE RHESRRIDNQ LRGRSGRQGD PGSSRFYLSL EDSLMRIFAS
DRVKNFMKAL GMQSGEAIEH RMVTNAIEKA QRKVEGRNFD IRKQLLEYDD VANEQRKVIY
HMRNSLLAAE NIGDTIVEFR KEVLDATISQ HIPPQSLPEQ WDVAGLEASL ASDFAIKLPI
RQWLDEDDHL YEETLREKLL SEITTAYTEK EDQAGLEALR TFEKQILLRV LDDLWKDHLS
TMDHLRHGIH LRGYAQKNPK QEYKRESFSL FQELLESIKR DTIRVLSHVQ VRREDPAEEE
ARLRREAEEL ASRMQFQHAA APGLGSEQLS EEGAEVAVAS APVRNDQKLG RNEPCWCGSG
KKFKHCHGQI E
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