Gene PP_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1343 
SymbollpxC 
ID1042966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1530283 
End bp1531194 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content59% 
IMG OID637144744 
ProductUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 
Protein accessionNP_743502 
Protein GI26988077 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00568936 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.47731e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATTAAAC AACGCACCCT GAAGAATACC ATCCGTGCCA CAGGTGTCGG TCTGCACTCC 
GGGGAGAAGG TTTACCTGAC CCTCAAGCCT GCACCTGTTG ACACCGGCAT CGTCTTCCGC
CGCGCCGACC TCGACCCTGT GGTCGAGATC CCTGCGCGTG CGGCCAACGT CGGCGAGACA
ACCATGTCGA CGACGCTGGT CAACGGTGAC GTCAAGGTCG ATACGGTCGA GCACCTGCTC
TCCGCCATGG CGGGTCTGGG CATCGATAAC GCCTACGTCG AGCTCTCCGC CTCGGAAGTG
CCGATCATGG ATGGCAGCGC CGGTCCTTTT GTATTCCTGA TTCAGTCTGC CGGCCTGGAA
GAACAGGACG CAGCCAAGAA GTTCATCCGC ATCCTGCGTG AGGTAACCGT GGAAGAGGGC
GACAAGCGCG CCACGTTCCT GCCTTTCGAA GGTTTCAAGG TGAGCTTCGA GATCGATTTC
GATCACCCGG TGCTTCGCAA CCGGACCCAG AGCGCCAGCG TCGACTTTTC CAGCACGTCG
TTCGTGAAGG AAGTCAGCCG CGCGCGTACT TTTGGCTTCA TGCGTGACAT CGAGTACCTG
CGCAAGCACA ACCTTGCGTT GGGTGGCAGT GTCGAGAACG CCATCGTGGT CGATGAGGAC
GGCGTGCTCA ACGAAGACGG CCTTCGTTAC GAAGACGAAT TCGTCAAGCA CAAGATCCTC
GACGCCATCG GCGATCTGTA CCTGCTAGGC AACAGCCTGA TCGGCGAGTT CAAGGGCTTC
AAGTCCGGCC ACGCGCTGAA CAACCAGCTG TTGCGCAAGC TGATTGCTGA AACCGATGCC
TGGGAAGTGG TCACTTTCGA AGATGCCAGC ACGGCACCGA TCTCGTACAT GCGCCCTGTT
GCGGCCGTGT AA
 
Protein sequence
MIKQRTLKNT IRATGVGLHS GEKVYLTLKP APVDTGIVFR RADLDPVVEI PARAANVGET 
TMSTTLVNGD VKVDTVEHLL SAMAGLGIDN AYVELSASEV PIMDGSAGPF VFLIQSAGLE
EQDAAKKFIR ILREVTVEEG DKRATFLPFE GFKVSFEIDF DHPVLRNRTQ SASVDFSSTS
FVKEVSRART FGFMRDIEYL RKHNLALGGS VENAIVVDED GVLNEDGLRY EDEFVKHKIL
DAIGDLYLLG NSLIGEFKGF KSGHALNNQL LRKLIAETDA WEVVTFEDAS TAPISYMRPV
AAV