| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1335 |
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| Symbol | murD |
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| ID | 1041728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1520740 |
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| End bp | 1522092 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637144736 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | NP_743494 |
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| Protein GI | 26988069 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.484873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGT CTTTGATCGC TTCCGACCAA TTCCGCATCG TTGTCGGCCT CGGCAAGAGC
GGCATGTCCC TGGTTCGCTT CCTGGCGAGC CGGGGCATTG CCTTTGCGGT CGCCGATACC
CGCGAGCAGC CGCCGGAACT GGAAACCCTG CGCCGTGATT ACCCGCAGGT GGAAGTGCGC
TGTGGTGAAC TGGACGTGGA CTTCCTGTGC CGCGCCAACG AGCTGTACGT GAGCCCCGGC
CTGGCCTTGG CCACGCCGGC CTTGCAGCAG GCTGCCGCGC GTGGCGTGAA GCTGTCTGGC
GACATAGAGC TGTTTGCTCG CCATGCCAAG GCGCCGATCG TTGCCATCAG TGGTTCCAAC
GCCAAGAGCA CCGTCACGAC GCTGGTCGGT GAAATGGCCG CCAAGGCCGG CAAACGCGTG
GCCGTGGGCG GTAACCTCGG TACCCCGGCA CTCGACCTGC TGGCCGATGA CATCGAGCTG
TACGTGCTGG AGCTTTCCAG CTTCCAGCTG GAAACCACTG ACCAGCTCAA CGCCGAAGTG
GCGACCGTTC TGAACATCAG CGAAGACCAC ATGGACCGCT ATAGCGGCCT TCCGGCCTAC
CACCTGGCCA AACACCGGAT TTTCCGCGGT GCCCGCCAGG TGGTGGTCAA CCGCCAGGAC
GCCCTGAGCC GGCCGCTGCC GGTGGAAGGC CGTCCATGCT GGACCTTCGG CCTCAACCCG
CCCGACTTCA AAGCGTTTGG CCTGCGTGAA GTGGACGGTG AGAAATACCT GGCGTTCGAG
TTCCAGACGC TGATGCCGGC GCGTGAACTG AAGGTTCGCG GTGCTCACAA CCAGAGTAAC
GCCCTGGCGG CGCTGGCCCT GGGGCATGCT GCCGGCCTGC CGTTCGAGCC CATGCTGGAG
GCTCTGCGCG AATTCGGTGG CCTGGCCCAC CGGTGCCAGT GGGTACGCGA GCGTAATGGC
GTGAACTGGT ACGACGATTC CAAAGCCACC AACGTCGGTG CAGCCCTGGC CGCCATCGAA
GGCCTGGGCG CTGATATCGA AGGCAAGTTG GTGCTGATCG CCGGTGGTGA CGGCAAAGGT
GCTGAATTCA CTGCGCTGCG CGAGCCGGTC AAGCGTTTCT GCCGCGCCGT GGTATTGCTT
GGCCGTGATG CCGAGCGCCT GGCCGAGGCC TTGGGCGATG CCGTGCCACT GGTTCGGGTC
AAGACGCTTG ACGATGCCGT ACAGCAGTGT GCCGAACTGG CCCAGGCCGG CGATGCCGTG
CTGCTGTCGC CAGCATGCGC CAGCCTCGAC ATGTTCAAGA ACTTCGAGGA ACGGGGACGC
CTGTTCGCCC AGGCAGCGGG AGGTCTTGCA TGA
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| Protein sequence | MSVSLIASDQ FRIVVGLGKS GMSLVRFLAS RGIAFAVADT REQPPELETL RRDYPQVEVR
CGELDVDFLC RANELYVSPG LALATPALQQ AAARGVKLSG DIELFARHAK APIVAISGSN
AKSTVTTLVG EMAAKAGKRV AVGGNLGTPA LDLLADDIEL YVLELSSFQL ETTDQLNAEV
ATVLNISEDH MDRYSGLPAY HLAKHRIFRG ARQVVVNRQD ALSRPLPVEG RPCWTFGLNP
PDFKAFGLRE VDGEKYLAFE FQTLMPAREL KVRGAHNQSN ALAALALGHA AGLPFEPMLE
ALREFGGLAH RCQWVRERNG VNWYDDSKAT NVGAALAAIE GLGADIEGKL VLIAGGDGKG
AEFTALREPV KRFCRAVVLL GRDAERLAEA LGDAVPLVRV KTLDDAVQQC AELAQAGDAV
LLSPACASLD MFKNFEERGR LFAQAAGGLA
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