Gene PP_1317 details

Gene Information

• Locus tag: PP_1317
• Symbol: petA
• ID: 1044363
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: +
• Start bp: 1504292
• End bp: 1504885
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637144719
• Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit
• Protein accession: NP_743477
• Protein GI: 26988052
• COG category: [C] Energy production and conversion
• COG ID: [COG0723] Rieske Fe-S protein
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence; [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCAATG ACGGCGTCAA CGCAGGCCGG CGCCGCTTCC TCGTAGCCGC GACATCCGTG 
GTCGGGGCGG CGGGGGCAGT GGGGGCTGCG GTACCGTTCG TGGGGTCATG GTTTCCCAGT 
GCCAAGGCGA AAGCCGCGGG TGCACCGGTG AAGGTCAACA TCGCCAAGGT CGAGGCAGGG 
CAGCAGATGG TGGCCGAGTG GCGTGGCCAG CCCGTATTCA TCGTGCGGCG AACGGAGGAA 
ATCCTTGGCA ATCTGAAAAA AATCACGGGT GACCTGTCCG ACCCCGAGTC CAAGGCCTCG 
GTACAGCCAG CGTACGTCGA CCCTGAGGTT CGCTCGATCA AGCCGGAAAT TCTCATTCTC 
GTCGGCCTGT GCACGCACCT GGGCTGCTCG CCCACCTTCC GGCCAGAAGT GGCGCCCGCC 
GACCTTGGGC CGAAATGGGT AGGTGGTTAC TTCTGCCCGT GCCACGGCTC TCACTATGAC 
CTGGCTGGTC GTGTCTACAA GTCCCAGCCG GCGCCTCTCA ACCTGCCCGT GCCACCGCAC 
TCTTATGAGT CGGACGAGAT CATCGTCATT GGCGTCGACC AGGAGAACGC ATGA 

 

Protein sequence

MSNDGVNAGR RRFLVAATSV VGAAGAVGAA VPFVGSWFPS AKAKAAGAPV KVNIAKVEAG 
QQMVAEWRGQ PVFIVRRTEE ILGNLKKITG DLSDPESKAS VQPAYVDPEV RSIKPEILIL 
VGLCTHLGCS PTFRPEVAPA DLGPKWVGGY FCPCHGSHYD LAGRVYKSQP APLNLPVPPH 
SYESDEIIVI GVDQENA