Gene PP_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1306 
Symbol 
ID1043967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1492592 
End bp1494868 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content55% 
IMG OID637144708 
Productpyocin S-type Killer domain-containing protein 
Protein accessionNP_743466 
Protein GI26988041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGGA GAACCTACAT GGCACGGGAC AATACGTATT ATCTCGATGA GGCGCTATAC 
ATCAGTGCGC AAGCACCTAC AGGTATTGAA CTGAGTTTTA TCGGTGGCGG TGGGCCGGGC
TCAGGTGGCT GGGGGCTAAG CGATGGTTAT CCACGCGGCA CCAGCCCAAC CAAAAATGAT
ATTGCTCGGG TTATTTCCAC GCGTAGGGTG CTGACAGAAG AATTTCAAAT CATCGAAAAG
GACTATTCAG ATAAGTATGC TCATGAAACA AACCAGCTTC CTGAAACTAT AAATGCACTA
AAAGCCCAGA TCAAAGCCGA GGCGAGCAGT ACAAACGGCG CGGCATCACC ATTCGTAACA
GAGCAACAAA TCCTGTCGTC GCGCATCAGC CAGATTCGTG ATGGTTATCT GCAGATTTTA
CCCGACGCCA ACAACTACTT TGGCGTACCC GCATTCTACA AGCGGGGCGA CTCAATGATG
AGCCGGTTTC TAGACCCGGG TTTCTTCGCA GCAACAACAG GCCAGGAATT AGGCGTGGAA
TGGGCCACAA GGCTGCAGAA GTCTTGGGAG GGTACGTACC GTTTACACCT GGAAGCTCAG
AAGCACCAAG CATTGGCTGA CGAACTTCGA GCACTGGCAA GCCAGGTAGA TCAGGAAGAA
CTCAGCCAGC AACCGCTGGA TTTGTTGCAG GTGATTGCGC GTAGAACAGC GCAGATCCAC
ACAGAGCGAC AAATACATTT CGATTGTTTA CCCAACGTCC TTCAGCATGA GCTGGGTCAA
ACCGTCATTG ACGACACGCT CACGCTTGTC CAAACCTTCA GTACCTACCT GGCAACTGCT
GCCGCCTTGG TGCAGGCCAA GCAGTCGCAA ATTCCCCCCT ATCAAGATCA AAACCCGCGC
ATCAACAGCC CCCTGTCGAA ACCACAACTT GAAGGGCTTT TGCACCTTGT AGATGAGCAA
CGGTTGCGCC GGGCTGGCCC ACGCTGGCAG GAATACCACC TGGCACTGGC GCTAACCGAA
TCGATCAGAT TCCTGGGGGT ATATGCAGGT GCCACGCAGA ACCTGATGCA GCGCGCGGCT
GAAGTGGAAA ACCTCCAGGC TCAACTCGCT GCACAGGAAG AAGCTGCACG CCAGCAGGCC
GAAGCCGAAC GCTTGGCTGC TGAAGCCGAG CGCCAAAGGC AAGAGGCTTT GCGGCGTAGT
GTCTCCTATA TCAATGAAGC GCGGCTAGCG GTATCCACAC CTGCCGTAAT CCCAATTGGG
GCTACCACTT TTGCCGTAGC CGAAGCGGCT TACTCTGCCT TGGCTGAATC GATCGCAGCG
GCACTTACCC GGCTTGTTGC TACGACTGTC CCTTCGGTCG CAGTAGGCAC CCTTGCGATG
GCCTGGCCAT CAACGCTGGG CAACAGTGAA CGCCAGTACC TCATCAGCAC CCCACTCGAC
AGCCTTAGCC CTGCCGGTGG GCCCGACCTT GCTGCCTTGG CGGCATCCTC GACCAGCATC
GACCTGCCCT ACCTTCTGGC GGGGGTTGAG AACGAAAACG AACTGGATCT CTACGTGGTG
CCGAGTGGCA AGCCGGTGGC GGTACGCGCA GCAACGTTCG ACAGCGAGCG GCAGGTCTAC
AGCCTGGCGC TGGATAATCC GCAACGGATT CTGACCTGGA CACCCGCCAG CGCGCCGGGT
GGCGATGAGG GAAACTCCAC CAGCCTACCG CTAGTCCCGC CTGGTACCGT CGTGTACACC
GGCAGCAGCC TGAACCCTGT CGTCACCGAG CAGGAGGGTT ACCCCGCGCT TGATCTGCTG
GACCAGGAAC GGCTGATCAT CACCTTCCCC ATGGACTCCG GATTACCGCC TATTCTGGTG
GTGTTCAAGA GCCCGCGATA CGAGGCAGGA ACATCGACCG GACATGGTGC ACAGGTGTCA
GATACATGGC GAAAGGAGGC AGCCAGCCTT GAGGGTGCTC CGATTCCTGC TCAAATTGCA
GAACTTCTTA AAAGTAGGGA ATTCAGAAAT TTTGACGCAT TCCGGCGACA GTTCTGGAAA
GCGGTGGCTA ATGATCCTGA GCTTTCAAAG CAATTTGATG AAATGAGCCT GAGTCGGATG
AGAAAAAACG GCTACTCACC GATAGTCGAT TTCCCAGACA GCCACCTGAG CCAAAAGACC
TTTATACTTC ATCATGTAAT CCCGATCAGT GAAGGGGGCG GCGTTTATGA CATGGATAAC
ATTCGTATTG TCACACCGCT ATCGCACAAC AGCATTCACT ACGGAACAAA ACCATGA
 
Protein sequence
MIRRTYMARD NTYYLDEALY ISAQAPTGIE LSFIGGGGPG SGGWGLSDGY PRGTSPTKND 
IARVISTRRV LTEEFQIIEK DYSDKYAHET NQLPETINAL KAQIKAEASS TNGAASPFVT
EQQILSSRIS QIRDGYLQIL PDANNYFGVP AFYKRGDSMM SRFLDPGFFA ATTGQELGVE
WATRLQKSWE GTYRLHLEAQ KHQALADELR ALASQVDQEE LSQQPLDLLQ VIARRTAQIH
TERQIHFDCL PNVLQHELGQ TVIDDTLTLV QTFSTYLATA AALVQAKQSQ IPPYQDQNPR
INSPLSKPQL EGLLHLVDEQ RLRRAGPRWQ EYHLALALTE SIRFLGVYAG ATQNLMQRAA
EVENLQAQLA AQEEAARQQA EAERLAAEAE RQRQEALRRS VSYINEARLA VSTPAVIPIG
ATTFAVAEAA YSALAESIAA ALTRLVATTV PSVAVGTLAM AWPSTLGNSE RQYLISTPLD
SLSPAGGPDL AALAASSTSI DLPYLLAGVE NENELDLYVV PSGKPVAVRA ATFDSERQVY
SLALDNPQRI LTWTPASAPG GDEGNSTSLP LVPPGTVVYT GSSLNPVVTE QEGYPALDLL
DQERLIITFP MDSGLPPILV VFKSPRYEAG TSTGHGAQVS DTWRKEAASL EGAPIPAQIA
ELLKSREFRN FDAFRRQFWK AVANDPELSK QFDEMSLSRM RKNGYSPIVD FPDSHLSQKT
FILHHVIPIS EGGGVYDMDN IRIVTPLSHN SIHYGTKP