Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1306 |
Symbol | |
ID | 1043967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1492592 |
End bp | 1494868 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637144708 |
Product | pyocin S-type Killer domain-containing protein |
Protein accession | NP_743466 |
Protein GI | 26988041 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCAGGA GAACCTACAT GGCACGGGAC AATACGTATT ATCTCGATGA GGCGCTATAC ATCAGTGCGC AAGCACCTAC AGGTATTGAA CTGAGTTTTA TCGGTGGCGG TGGGCCGGGC TCAGGTGGCT GGGGGCTAAG CGATGGTTAT CCACGCGGCA CCAGCCCAAC CAAAAATGAT ATTGCTCGGG TTATTTCCAC GCGTAGGGTG CTGACAGAAG AATTTCAAAT CATCGAAAAG GACTATTCAG ATAAGTATGC TCATGAAACA AACCAGCTTC CTGAAACTAT AAATGCACTA AAAGCCCAGA TCAAAGCCGA GGCGAGCAGT ACAAACGGCG CGGCATCACC ATTCGTAACA GAGCAACAAA TCCTGTCGTC GCGCATCAGC CAGATTCGTG ATGGTTATCT GCAGATTTTA CCCGACGCCA ACAACTACTT TGGCGTACCC GCATTCTACA AGCGGGGCGA CTCAATGATG AGCCGGTTTC TAGACCCGGG TTTCTTCGCA GCAACAACAG GCCAGGAATT AGGCGTGGAA TGGGCCACAA GGCTGCAGAA GTCTTGGGAG GGTACGTACC GTTTACACCT GGAAGCTCAG AAGCACCAAG CATTGGCTGA CGAACTTCGA GCACTGGCAA GCCAGGTAGA TCAGGAAGAA CTCAGCCAGC AACCGCTGGA TTTGTTGCAG GTGATTGCGC GTAGAACAGC GCAGATCCAC ACAGAGCGAC AAATACATTT CGATTGTTTA CCCAACGTCC TTCAGCATGA GCTGGGTCAA ACCGTCATTG ACGACACGCT CACGCTTGTC CAAACCTTCA GTACCTACCT GGCAACTGCT GCCGCCTTGG TGCAGGCCAA GCAGTCGCAA ATTCCCCCCT ATCAAGATCA AAACCCGCGC ATCAACAGCC CCCTGTCGAA ACCACAACTT GAAGGGCTTT TGCACCTTGT AGATGAGCAA CGGTTGCGCC GGGCTGGCCC ACGCTGGCAG GAATACCACC TGGCACTGGC GCTAACCGAA TCGATCAGAT TCCTGGGGGT ATATGCAGGT GCCACGCAGA ACCTGATGCA GCGCGCGGCT GAAGTGGAAA ACCTCCAGGC TCAACTCGCT GCACAGGAAG AAGCTGCACG CCAGCAGGCC GAAGCCGAAC GCTTGGCTGC TGAAGCCGAG CGCCAAAGGC AAGAGGCTTT GCGGCGTAGT GTCTCCTATA TCAATGAAGC GCGGCTAGCG GTATCCACAC CTGCCGTAAT CCCAATTGGG GCTACCACTT TTGCCGTAGC CGAAGCGGCT TACTCTGCCT TGGCTGAATC GATCGCAGCG GCACTTACCC GGCTTGTTGC TACGACTGTC CCTTCGGTCG CAGTAGGCAC CCTTGCGATG GCCTGGCCAT CAACGCTGGG CAACAGTGAA CGCCAGTACC TCATCAGCAC CCCACTCGAC AGCCTTAGCC CTGCCGGTGG GCCCGACCTT GCTGCCTTGG CGGCATCCTC GACCAGCATC GACCTGCCCT ACCTTCTGGC GGGGGTTGAG AACGAAAACG AACTGGATCT CTACGTGGTG CCGAGTGGCA AGCCGGTGGC GGTACGCGCA GCAACGTTCG ACAGCGAGCG GCAGGTCTAC AGCCTGGCGC TGGATAATCC GCAACGGATT CTGACCTGGA CACCCGCCAG CGCGCCGGGT GGCGATGAGG GAAACTCCAC CAGCCTACCG CTAGTCCCGC CTGGTACCGT CGTGTACACC GGCAGCAGCC TGAACCCTGT CGTCACCGAG CAGGAGGGTT ACCCCGCGCT TGATCTGCTG GACCAGGAAC GGCTGATCAT CACCTTCCCC ATGGACTCCG GATTACCGCC TATTCTGGTG GTGTTCAAGA GCCCGCGATA CGAGGCAGGA ACATCGACCG GACATGGTGC ACAGGTGTCA GATACATGGC GAAAGGAGGC AGCCAGCCTT GAGGGTGCTC CGATTCCTGC TCAAATTGCA GAACTTCTTA AAAGTAGGGA ATTCAGAAAT TTTGACGCAT TCCGGCGACA GTTCTGGAAA GCGGTGGCTA ATGATCCTGA GCTTTCAAAG CAATTTGATG AAATGAGCCT GAGTCGGATG AGAAAAAACG GCTACTCACC GATAGTCGAT TTCCCAGACA GCCACCTGAG CCAAAAGACC TTTATACTTC ATCATGTAAT CCCGATCAGT GAAGGGGGCG GCGTTTATGA CATGGATAAC ATTCGTATTG TCACACCGCT ATCGCACAAC AGCATTCACT ACGGAACAAA ACCATGA
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Protein sequence | MIRRTYMARD NTYYLDEALY ISAQAPTGIE LSFIGGGGPG SGGWGLSDGY PRGTSPTKND IARVISTRRV LTEEFQIIEK DYSDKYAHET NQLPETINAL KAQIKAEASS TNGAASPFVT EQQILSSRIS QIRDGYLQIL PDANNYFGVP AFYKRGDSMM SRFLDPGFFA ATTGQELGVE WATRLQKSWE GTYRLHLEAQ KHQALADELR ALASQVDQEE LSQQPLDLLQ VIARRTAQIH TERQIHFDCL PNVLQHELGQ TVIDDTLTLV QTFSTYLATA AALVQAKQSQ IPPYQDQNPR INSPLSKPQL EGLLHLVDEQ RLRRAGPRWQ EYHLALALTE SIRFLGVYAG ATQNLMQRAA EVENLQAQLA AQEEAARQQA EAERLAAEAE RQRQEALRRS VSYINEARLA VSTPAVIPIG ATTFAVAEAA YSALAESIAA ALTRLVATTV PSVAVGTLAM AWPSTLGNSE RQYLISTPLD SLSPAGGPDL AALAASSTSI DLPYLLAGVE NENELDLYVV PSGKPVAVRA ATFDSERQVY SLALDNPQRI LTWTPASAPG GDEGNSTSLP LVPPGTVVYT GSSLNPVVTE QEGYPALDLL DQERLIITFP MDSGLPPILV VFKSPRYEAG TSTGHGAQVS DTWRKEAASL EGAPIPAQIA ELLKSREFRN FDAFRRQFWK AVANDPELSK QFDEMSLSRM RKNGYSPIVD FPDSHLSQKT FILHHVIPIS EGGGVYDMDN IRIVTPLSHN SIHYGTKP
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