Gene PP_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1301 
SymbolalgW 
ID1044377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1487112 
End bp1488320 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content63% 
IMG OID637144703 
Product2-alkenal reductase 
Protein accessionNP_743461 
Protein GI26988036 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACT GCCAGGCCGC TGGCCCATGC TCTTTCCAGG ATTCGTTCAT GTTCAAGGCT 
TTGCGTTACT TCGGCTGGCC CCTGCTTACC GGCATACTGA TCGCCATGCT GATCATCCAG
CGTTTTCCGC AATGGGTCGG GCTGCCCAGC CAGGACGTCA ACCTGCAGCA AGCGCCACAG
ACTACCCGGA TCATGCAAGG CCCGGTGTCG TACGCCGACG CCGTGACCCT GGCCGCCCCG
GCGGTGGCCA ACCTGTACAC CACCAAGGTG GTGAACAAAA GCGCCCACCC GCTGTTCGAA
GACCCGCAGT TCCGCCGCTT CTTCGGCGAT AACCTGCCCA AACAGCGCCG CTGGGAATCA
AGCCTGGGTT CGGCGGTAAT CATGAGCCCA GAGGGCTACC TGCTGACCAA CAACCATGTC
ACCAGCGGCG CCGACCAGAT CGTCGTAGCC CTGAAGGATG GCCGCGAAAC CCTGGCCCGC
GTGATCGGCA GCGACCCGGA AACCGACCTG GCGGTGCTGA AGATCGACTT GAAGAACCTC
CCGGCGATCA CCATCGGCCG TTCCGACACC ATTCACATCG GCGACGTGTC GCTGGCCATC
GGCAACCCGT TCGGCGTCGG CCAGACTGTG ACCATGGGCA TCATCAGCGC CACTGGCCGC
AACCAGCTGG GGCTGAACAA CTACGAAGAC TTCATCCAGA CCGACGCGGC GATCAACCCG
GGCAACTCCG GTGGTGCGCT GGTGGATGCC AATGGCAACC TGATCGGCAT CAATACCGCG
ATCTTCTCCA AGTCGGGTGG CTCGCAGGGC ATCGGCTTCG CCATCCCGGT AAAACTCGCA
CTGGAGGTGA TGAAGTCGAT CGTCGAACAC GGCCAGGTGA TCCGTGGCTG GCTGGGTATC
GAAGTGCAGC CACTGAGCCA GGAGCTGGCA GAATCGTTCG GCATGAAGGA CCGCCCAGGC
ATCGTGGTGG CGGGTATCTT CCGCGAAGGG CCAGCGGCCA AGGCCGGGTT GCACCTGGGT
GACGTGATCC TGAGCATCAA TGGCGAGCCG GCCGGCGACG GACGCAAGTC GATGAACCAG
GTAGCGCGGA TCAAGCCCAA CGAGAAGATA ACCATCGAGG TGATGCGCAA CGGGCAGCAG
TTGAAGCTGA TCGCCGAGGT GGGGCTGCGG CCGCCACCGG CGCCGGCTGC CAGCCAGGAA
GAGAAATAA
 
Protein sequence
MPHCQAAGPC SFQDSFMFKA LRYFGWPLLT GILIAMLIIQ RFPQWVGLPS QDVNLQQAPQ 
TTRIMQGPVS YADAVTLAAP AVANLYTTKV VNKSAHPLFE DPQFRRFFGD NLPKQRRWES
SLGSAVIMSP EGYLLTNNHV TSGADQIVVA LKDGRETLAR VIGSDPETDL AVLKIDLKNL
PAITIGRSDT IHIGDVSLAI GNPFGVGQTV TMGIISATGR NQLGLNNYED FIQTDAAINP
GNSGGALVDA NGNLIGINTA IFSKSGGSQG IGFAIPVKLA LEVMKSIVEH GQVIRGWLGI
EVQPLSQELA ESFGMKDRPG IVVAGIFREG PAAKAGLHLG DVILSINGEP AGDGRKSMNQ
VARIKPNEKI TIEVMRNGQQ LKLIAEVGLR PPPAPAASQE EK