| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1274 |
|---|
| Symbol | |
|---|
| ID | 1042248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 1456168 |
|---|
| End bp | 1456980 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637144676 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | NP_743434 |
|---|
| Protein GI | 26988009 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.145274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCG TCCTGATCAC CGGTTGTTCC AGCGGCATCG GCCGCGCCCT GGCCGACGCC
TTCCGCGATG CGGGCCACCA TGTCTGGGCC ACCGCCCGCA AGCCTGAGGA TGTCGAGAAA
CTGAGTGCCG CCGGCTACAC GGCTCGGCAG CTGGATGTAA ACGATGGCGA GGCGCTGGCC
CGCCTGGCAG AGGAACTTGA TACCCTCGAT ATCCTGATCA ACAACGCCGG CTACGGCGCC
ATGGGCCCAC TGCTCGATGG TGGCGTCGAC GCCCTGCGCC AGCAATTCGA AACCAACGTC
TTCGCCGTGG TCGGCGTTAC CCGGGCGCTG TTCCCGCTGC TACGCCGCTC ACGCGGCCTG
GTGGTGAATA TCGGCAGTGT ATCGGGCGTA CTGGTCACGC CATTCGCTGG CGCGTACTGC
GCCTCGAAGG CGGCTGTGCA TGCCCTGAGC GATGCCTTGC GCCTGGAACT GGCGCCGTTC
GGTGTACGGG TAATGGAAGT ACAGCCGGGC GCAATCGCCT CGCAGTTCGC CAGCAATGCC
CAGCGCCAGG CCGAGCAGGT GCTGGCGGCA GACTCGGCGT GGTGGCCTTT GCGTGAGCAT
GTGCAGGCGC GGGCGCGGGC ATCGCAGGAC AAGCCAACGT CGGCGGCGGT ATTTGCCCAA
GGCGTGCTGG CAGCCGTCGG CAAGTCGCCG GCGCCCGCGG TGGTACGTTT GGGGAATGGC
AGTACAGCCT TGCCGCTGAT GGCACGGTTG CTGCCGCGGC GGTTGCTGGA CTGGGTGCTG
CGCAAGCGCT TTGGCCTGCT GCGCCCGCTC TGA
|
|---|
| Protein sequence | MPTVLITGCS SGIGRALADA FRDAGHHVWA TARKPEDVEK LSAAGYTARQ LDVNDGEALA
RLAEELDTLD ILINNAGYGA MGPLLDGGVD ALRQQFETNV FAVVGVTRAL FPLLRRSRGL
VVNIGSVSGV LVTPFAGAYC ASKAAVHALS DALRLELAPF GVRVMEVQPG AIASQFASNA
QRQAEQVLAA DSAWWPLREH VQARARASQD KPTSAAVFAQ GVLAAVGKSP APAVVRLGNG
STALPLMARL LPRRLLDWVL RKRFGLLRPL
|
|---|
| |