| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1273 |
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| Symbol | |
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| ID | 1044323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1454465 |
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| End bp | 1455919 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637144675 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | NP_743433 |
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| Protein GI | 26988008 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0681573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGG GATTACGCTT GAGCCCTTTG CTGCTGGCTG TGCTGCTGAC CGGTTGCACC
CTGGGCCCGG ATTTCCAGCG CCCAGATAGC CAGGCCCCGC AGCAGTGGGC GCCGCTGCAA
GGCGAGGCAG CGGCCAGTCA GCCGCAGGCC GAACCGCTTG AACTGCGCTG GTGGGAAACG
TTCCACGATG CCCGCCTGAG CGCGTTGATC CAGCGCGTTG CCGAACGCAA CCTCGACCTG
CAGATGGCCA GCGCGCGGTT GCTGCAAAGC CGTGCCCTGC GCAGTACCTT GGCTGCCGAC
GAAGTACCGT CGGTGGACGT GAACGCCGGT TACAGCCGTG CTCGTAACAG CGCCGATGGT
TTGAGCGATC CGTCCGGCAA GGCCGGGAAA GAAGCCTTCA ACCTCTGGCA GGGCGACCTG
GTGGCCGGTT GGGAACTGGA TCTGTGGGGC CGTGTGCGGC GTCAGGTCGA GGCTGCCGAT
GCCACGGTCG AAGTGGCCGA GAATGACCGC CGCGGTGTGC TGCTGGCACT GCTTTCGGAA
ACCGCCGGCA ATTACATCCA GCTGCGTGCC GTGCAGCACA CCCTCGATGT GACGCAGGAT
AACCTCAGGG TCGCCCGGCA CAGCCTGAAG CTGTCCCAGG ACCGCCAGGC CGAAGGCGTT
GCCACGCGCC TGGATGTGGC CCAGGCCAGC GCCCAGGTCG CGTCTATCGA GTCGCGCCTG
CCAAGCCTGG AAGCGCAGCG TGATGACCTG ATCAATGCCC TCAGCCTGCT CGCTGCCGAG
CCGCCGCGCA GTCTCCAGGC CGAATTGCTG CAAGGCGGCG AGCTGCCTGC GCCGCAGCAG
AAGTTTGCCA TCGGCTTGCC GTCCGAACTG GCCGAGCGCC GCCCGGACAT CCGCCAGGCC
GAGGCCCGCC TGCATGCCGC CACCGCCAGC ATTGGCGTGG CCAAGGCGGA TTTTTACCCC
AGCATCCGCC TGTCGGGCAG TGTCGGCTTC CAGGCCCTGC AGCTGTCGGA TTTCGGTGGC
TGGGATTCGC GCCGGTTTGC CTTCGGTCCA CAGATGTCGC TGCCGATTTT CGAAGGTGGC
CGGCTCAAGG GCACCCTGGA ACTGCGCGAG GCGCAACAGC AGGAAGCCGC GCTGAACTAT
CGCAAGGTGG TGCTGGGGGC CTGGCATGAA ATTGACGATG TGCTACGCCT GTACAACGCC
AGTCAGTTGC GCCGTGATCA CCTTGCCGAG GCCGTGCGGC AAAACCGAAT CGCCCTGGAA
ACCGCCCAGC GCCAGTATGT GGAAGGGGCG GTGGACTTTC TCAATGTGCT GACGGTGCAA
GGTGCGCTGC TGGCCAGCGA GGAGCAATGG ATCGACAGCT CGGCCGCGGT GTCGCAGGCG
CTGGTGGGGC TGTACAAGGC GCTGGGTGGA GGCTGGCAGG CGTTTGATGA GCCGCCGCCG
AATGCTCACG GTTAG
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| Protein sequence | MKPGLRLSPL LLAVLLTGCT LGPDFQRPDS QAPQQWAPLQ GEAAASQPQA EPLELRWWET
FHDARLSALI QRVAERNLDL QMASARLLQS RALRSTLAAD EVPSVDVNAG YSRARNSADG
LSDPSGKAGK EAFNLWQGDL VAGWELDLWG RVRRQVEAAD ATVEVAENDR RGVLLALLSE
TAGNYIQLRA VQHTLDVTQD NLRVARHSLK LSQDRQAEGV ATRLDVAQAS AQVASIESRL
PSLEAQRDDL INALSLLAAE PPRSLQAELL QGGELPAPQQ KFAIGLPSEL AERRPDIRQA
EARLHAATAS IGVAKADFYP SIRLSGSVGF QALQLSDFGG WDSRRFAFGP QMSLPIFEGG
RLKGTLELRE AQQQEAALNY RKVVLGAWHE IDDVLRLYNA SQLRRDHLAE AVRQNRIALE
TAQRQYVEGA VDFLNVLTVQ GALLASEEQW IDSSAAVSQA LVGLYKALGG GWQAFDEPPP
NAHG
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