| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1262 |
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| Symbol | |
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| ID | 1042458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1443236 |
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| End bp | 1444183 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637144664 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_743422 |
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| Protein GI | 26987997 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.902208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCC TGCAAAACAT GCGTGCTTTC AGTTGCGTAG CCCAACTCGG CAGCTTCACT
GCCGCTGCGG CGCAACTGGA TACGACCACC GCGAACGTGT CGCGGGCGGT CTCCAACCTG
GAAGCCCATC TGCAAACAAG GCTGCTCAAC CGTACCACCC GCCGCATTGC GCTGACCGAA
GCCGGCAAGC GTTACCTGAT GCGTTGCGAA CAGATTCTTA CCTACGTCGA AGAAGCCGAG
GCCGAAGCCA GCGACGCCCA TGCGCGCCCG GCCGGGCAGT TGAAGGTGCA TTCGATGACT
GGGGTCGGCC AGCACTTCGT GGTCGATGCC ATCGCCCGCT ACCGCGAAAC GCACCCGGAC
GTGACCTTCG ATTTGACCAT GGCCAACCGC GTGCCCGATC TGCTCGACGA GGGTTATGAC
GTCTCCATCG TGCTGGCCAC CGAACTGCCC GACTCGGGGT TCGTTTCGCA GCGCCTGGGC
ATCACCTACA GCATTGTCTG TGCCTCGCCC GCCTACATCG CCCAGCATGG CGTGGCGCAC
AAGCCTGCCG ACCTGCTCAA GCACGCCTGC CTGCGCATGG TCAGCCCGGT GATACCGCTG
GAGAAGTGGC TGTTCGATGG CCCGGAAGGC CAAGAGATGG TCAACATCAC CAGTTCGCCG
TTCATGGTGA ACACCGCCGA TGCCATGAAG ACTGCGATCC GCAGTGGCAT GGGCGTAGGC
GTGCTGCCGA TCTATTCGGC TATCGAGGGC CTGCGGGACG GTAGCCTGGT ACGGGTACTG
CCGGAGTATC GCCTGCAGGA GTTGAACCTG TATGCCATCT ATCCATCGCG GCAGTATCTG
GATGCCAAGA TCAAGACCTG GGTCGAGTAC CTGCGCAACT CGCTGCCAGA GATTCTTGCC
GCGCATGAGG CAGACCTGAA AACCCATCAG GTGCTGATCG CCAACTAA
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| Protein sequence | MDTLQNMRAF SCVAQLGSFT AAAAQLDTTT ANVSRAVSNL EAHLQTRLLN RTTRRIALTE
AGKRYLMRCE QILTYVEEAE AEASDAHARP AGQLKVHSMT GVGQHFVVDA IARYRETHPD
VTFDLTMANR VPDLLDEGYD VSIVLATELP DSGFVSQRLG ITYSIVCASP AYIAQHGVAH
KPADLLKHAC LRMVSPVIPL EKWLFDGPEG QEMVNITSSP FMVNTADAMK TAIRSGMGVG
VLPIYSAIEG LRDGSLVRVL PEYRLQELNL YAIYPSRQYL DAKIKTWVEY LRNSLPEILA
AHEADLKTHQ VLIAN
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