| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1248 |
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| Symbol | |
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| ID | 1041928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1424597 |
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| End bp | 1425364 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144650 |
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| Product | amino acid transporter LysE |
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| Protein accession | NP_743408 |
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| Protein GI | 26987983 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.483142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGG AATCATACAG ACTCCAGGCA TTGGATCCAA GCCGCGCTTG GCACAGGTTC
TTTGCAACTG TGCAACAACA GGTTGAAAAG CGCGCCTTTG GCGACGATAG TTCAGAGCAC
TGCCTTCGCA ATGCCCAACA GGAACTCACC ATGCTTGGCG TCACCGACTA CGGCGCATTC
GTCATCGCCT TCCTCATTCT TCTGGCCATC CCCGGCCCGG GCAATTTCGC CCTGATCACC
GCCACCGGCA AGGGCGGTAT CAAGGCAGGC CTGGCCGCGA CCTGTGGCGT GATCGTGGGT
GACCAGGTGC TGCTGTGGCT GGCGGTAGCC GGTGTCGCCA CCCTGCTGGC CACCTACCCT
GCCGCCTTTC ATATGGTGCA GTGGGCGGGG GCTGCATACC TGGCATACCT GGGCCTGCGC
ATGCTGCTGA GCAAACCCGG TGGTGCAGCA CACACCTGCC GCATGGACAA CGGCCAGTAC
CTGCGCCAGA CCATGATGAT CACCCTGCTC AACCCCAAGG CGATCATGTT CTACATGGCG
TTTTTCCCGC TGTTCGTCGA CCCGGTGAAG CACCAAGGGC TGGTGACGTT CGGTTTCATG
GCGGCGACAG TGGCGGTGGT GACCTTCCTG TATGGGCTGA TTGCCGTGGT GCTGACCCAT
CAACTGGCCG AGCGCATGCG CGCCAGCCCG CGAATTGCCA ATATGTTCGA GCGGCTGGCG
GGGGCTTGCC TGGTGGGATT CGGCATCAAA CTGGCGGCGA TGCGCTGA
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| Protein sequence | MAAESYRLQA LDPSRAWHRF FATVQQQVEK RAFGDDSSEH CLRNAQQELT MLGVTDYGAF
VIAFLILLAI PGPGNFALIT ATGKGGIKAG LAATCGVIVG DQVLLWLAVA GVATLLATYP
AAFHMVQWAG AAYLAYLGLR MLLSKPGGAA HTCRMDNGQY LRQTMMITLL NPKAIMFYMA
FFPLFVDPVK HQGLVTFGFM AATVAVVTFL YGLIAVVLTH QLAERMRASP RIANMFERLA
GACLVGFGIK LAAMR
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