Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1239 |
Symbol | |
ID | 1046147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1416751 |
End bp | 1417509 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144640 |
Product | beta-lactamase domain protein |
Protein accession | NP_743399 |
Protein GI | 26987974 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.668505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.852311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCTTCG CGGTACTCGG AAGCGGCAGC CAAGGGAACG GCACGCTGAT CGCCAGTGGT GACACGTTCA TCCTGGTCGA TTGCGGCTTT TCCCTGCGTG AAACCGAGCG GCGCCTGGCG CTGCTCGGGG TTTCTGCAGC TCAGCTCAGT GCAGTGCTGG TCACCCACGA ACATGCCGAC CACGTGCATG GGGTCGGCTT GCTGTCACGG CGCTACAATG TACCGGTCTA CCTCAGCCAA GGGACTTTGC GCGGCATGCG CAAGCCGGTG GAGGTGGCCG GTTTTCTCGC GTGTGGCCAA AGCCTGCATA TCGGCAGCCT GGAAGTAACC GCAGCGCGGG TCGAGCACGA CGCCTACGAG CCGTTGCAGT ACGTGGTCAG CGACGGCAAG CGGCGCTTTG GCATGCTGAC CGACCTGGGC TCTTACGACG CGCTGTTGCT GGAGCGTTAC CAGGGCCTGG ATGCACTGCT GATCGAGGCT AACCACTGTC GCGACCTGCT GGCACGTGGT CACTACCCGG CTTTTCTGAA GCAGCGGGTG GGTGGCATGC AAGGGCATTT GAACAACCAC CAGGCTGCGC GCCTGGTGCA CGAGTTGGGC TGGAACAACC TGCAACACCT GGTGCTGGCC CACCTCAGCA GCAAGAACAA CCTGCCACAC TTGGCCCGCC AGTGCTTTGT CGACACCCTC GGGTGTGACC CGGACTGGCT CCAGGTGGCG AATCAGGAAC ACGGGCTCGA CTGGCGCGAA ATCGCCTAG
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Protein sequence | MRFAVLGSGS QGNGTLIASG DTFILVDCGF SLRETERRLA LLGVSAAQLS AVLVTHEHAD HVHGVGLLSR RYNVPVYLSQ GTLRGMRKPV EVAGFLACGQ SLHIGSLEVT AARVEHDAYE PLQYVVSDGK RRFGMLTDLG SYDALLLERY QGLDALLIEA NHCRDLLARG HYPAFLKQRV GGMQGHLNNH QAARLVHELG WNNLQHLVLA HLSSKNNLPH LARQCFVDTL GCDPDWLQVA NQEHGLDWRE IA
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