Gene PP_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1239 
Symbol 
ID1046147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1416751 
End bp1417509 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content63% 
IMG OID637144640 
Productbeta-lactamase domain protein 
Protein accessionNP_743399 
Protein GI26987974 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.668505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.852311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTTCG CGGTACTCGG AAGCGGCAGC CAAGGGAACG GCACGCTGAT CGCCAGTGGT 
GACACGTTCA TCCTGGTCGA TTGCGGCTTT TCCCTGCGTG AAACCGAGCG GCGCCTGGCG
CTGCTCGGGG TTTCTGCAGC TCAGCTCAGT GCAGTGCTGG TCACCCACGA ACATGCCGAC
CACGTGCATG GGGTCGGCTT GCTGTCACGG CGCTACAATG TACCGGTCTA CCTCAGCCAA
GGGACTTTGC GCGGCATGCG CAAGCCGGTG GAGGTGGCCG GTTTTCTCGC GTGTGGCCAA
AGCCTGCATA TCGGCAGCCT GGAAGTAACC GCAGCGCGGG TCGAGCACGA CGCCTACGAG
CCGTTGCAGT ACGTGGTCAG CGACGGCAAG CGGCGCTTTG GCATGCTGAC CGACCTGGGC
TCTTACGACG CGCTGTTGCT GGAGCGTTAC CAGGGCCTGG ATGCACTGCT GATCGAGGCT
AACCACTGTC GCGACCTGCT GGCACGTGGT CACTACCCGG CTTTTCTGAA GCAGCGGGTG
GGTGGCATGC AAGGGCATTT GAACAACCAC CAGGCTGCGC GCCTGGTGCA CGAGTTGGGC
TGGAACAACC TGCAACACCT GGTGCTGGCC CACCTCAGCA GCAAGAACAA CCTGCCACAC
TTGGCCCGCC AGTGCTTTGT CGACACCCTC GGGTGTGACC CGGACTGGCT CCAGGTGGCG
AATCAGGAAC ACGGGCTCGA CTGGCGCGAA ATCGCCTAG
 
Protein sequence
MRFAVLGSGS QGNGTLIASG DTFILVDCGF SLRETERRLA LLGVSAAQLS AVLVTHEHAD 
HVHGVGLLSR RYNVPVYLSQ GTLRGMRKPV EVAGFLACGQ SLHIGSLEVT AARVEHDAYE
PLQYVVSDGK RRFGMLTDLG SYDALLLERY QGLDALLIEA NHCRDLLARG HYPAFLKQRV
GGMQGHLNNH QAARLVHELG WNNLQHLVLA HLSSKNNLPH LARQCFVDTL GCDPDWLQVA
NQEHGLDWRE IA