Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1225 |
Symbol | |
ID | 1041963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1401004 |
End bp | 1401651 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637144625 |
Product | radical SAM domain protein |
Protein accession | NP_743385 |
Protein GI | 26987960 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.879338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACA CATTACGCAT CACCGAAGTC TTTTACTCTT TGCAGGGTGA GACGCGAACG GCCGGGCTGC CCACGGTATT TGTGCGCCTC ACCGGTTGCC CCCTGCGTTG CCAGTACTGC GACAGTGCCT ATGCCTTCAG TGGCGGTACC GTACGCACCC TTGATTCGAT CCTCGAACAA GTGGCCGGCT TCAAACCGCG CTACGTCTGT GTCACCGGTG GCGAACCACT GGCCCAGCCC AACGCCTTGC CGTTGCTGCA GCGGCTGTGT GATGCCGGTT ACGAGGTGTC GCTGGAGACC AGCGGCGCGC TGGATATTGC CGGCACCGAC ACTCGCGTCA GCCGTGTGGT CGACCTGAAA ACCCCAGGCT CCGAAGAGTC GCACCGTAAC CGCTACGAGA ACATCGAGCA GCTGACACGC AACGACCAGG TCAAGTTCGT CATCTGTTCC CGCGAGGATT ATGACTGGGC GGTATCCAAG CTGATCCAGT ACAACCTGGC CGAGCGTGCC GGTGAGGTGT TGTTCTCACC CAGCCATCAT CAGGTGAACG CCAGTGACCT GGCTGACTGG ATCGTTGCTG ACAACCTGCC TGTACGCTTC CAACTGCAGC TGCACAAGTT GCTGTGGAAC GACGAGCCCG GACGTTGA
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Protein sequence | MQDTLRITEV FYSLQGETRT AGLPTVFVRL TGCPLRCQYC DSAYAFSGGT VRTLDSILEQ VAGFKPRYVC VTGGEPLAQP NALPLLQRLC DAGYEVSLET SGALDIAGTD TRVSRVVDLK TPGSEESHRN RYENIEQLTR NDQVKFVICS REDYDWAVSK LIQYNLAERA GEVLFSPSHH QVNASDLADW IVADNLPVRF QLQLHKLLWN DEPGR
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