| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1220 |
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| Symbol | tolR |
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| ID | 1046088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1396599 |
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| End bp | 1397051 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637144620 |
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| Product | biopolymer transport protein TolR |
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| Protein accession | NP_743380 |
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| Protein GI | 26987955 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.336788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGAG TTCGCCACAA ACGCAAGCCC GTCGCCGAGA TGAACGTGGT GCCCTACATC
GACGTGATGC TGGTGCTGCT GGTCATCTTC ATGGTGACGG CGCCCATGCT CAACCAGGGC
GTGAAGGTCG ACCTGCCCAA GGTTTCCAGC GAAGCCTTGC CGCAGGACAA CAACGTCCAG
ATCCTCACCA TCTCCATCAA GGCCGATAAA ACCTATTACT GGAACCTCGG CAGCGAAGTC
GATACCGACA AGCAGATGGA CAAAGCCATG ACCTTGCCGG CCATGACCGA CGCCGTGACC
AAGATCATTG CTGCCGGCCG TGACCAGGGC AAGCAGACCC AGGTGTTCAT TCGTGGCGAC
AAGGCTGTCG ACTATGGCGC GGTCATGGGT GCCATGGGCG GGTTGCAGAA GGCCGGTGTC
GGTAACGTTG GCCTGATTAC CGAGGCGCCC TGA
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| Protein sequence | MARVRHKRKP VAEMNVVPYI DVMLVLLVIF MVTAPMLNQG VKVDLPKVSS EALPQDNNVQ
ILTISIKADK TYYWNLGSEV DTDKQMDKAM TLPAMTDAVT KIIAAGRDQG KQTQVFIRGD
KAVDYGAVMG AMGGLQKAGV GNVGLITEAP
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