| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1206 |
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| Symbol | oprD |
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| ID | 1045899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1385189 |
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| End bp | 1386454 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637144606 |
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| Product | outer membrane porin |
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| Protein accession | NP_743366 |
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| Protein GI | 26987941 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGA TGAAGTGGAG CATGATCGCC CTGGCCGTTT CGGCAGGGAC CTCGCAGTTG
GCAATGGCCT CGGCACAGGA CGAGTCCAAA GGTTTCATCG AAGACAGCAA GCTGAGCGTC
AAGACCCGCA TGCTGTATTT CAGCCGTGAC TTCCGTAACA ACGAAGGCGG CCAGAGCCGT
CGCGAAGAAA CCGGCCTGGG CTTCGTCGGC ACCTTCGAGT CCGGCTTCAC CCAAGGCACC
GTGGGTGTGG GTGTCGACGC CATCGGCATG CTCGGCCTGA AACTGGACAG CGGCAAGGGC
CGTGCCGGTA CCGGCCTGTT CCCGACCGGT TCCGACGGCC GTTCGCAGGA TGACTACTCC
AAGGGCGGCG GCGCGGTCAA ATTCCGCATC TCCGACACCG TGCTGAAAGT GGGTGACCAG
TTCACCGCGC TGCCGGTCTT CGCCACCGAT GACAGCCGTC TGCTGCCAGA AATCGCCCAG
GGCACCCTGA TCACCAGCAA CGAGATCGAA GGGCTGACCC TGCACGCTGG TCACTTCACC
AGCCTGACTG CCCAGGAACA AACCAACCGC GACAGCTTCG GCCTGAAGGA AGCCAACGTG
GTCGGCGGCA CCTACGCCTT CACCGACAAC CTCAGCACCA GCCTGTACTA CTCGAAGGTT
GAAGACTACT GGCGCAAATA CTACGCCAAC GTCAACTGGG CGCTGCCAAT CTCCGACAAT
CAAGGCCTGG TGTTCGACTT CAACATCTAT GACACCAAGA GCGAAGGCTC TGCCGAGTAC
CGCGCCTTCG ATGGCGACAA GCTGGACAAC CGCGCGTTCA GCCTGTCGGG CGCCTACAAC
ATCGGCGCTC ACACCTTCAC CCTGGCCTAC CAGAAAGTCA CCGGCGACGG CGACTATGGT
TATGGTATCG ACGGTGGCGG CACCATCTTC CTGGCCAACT CCGTGGCCCG CTCCGACTTC
AACGCCGAAG ACGAGAAATC CTGGCAGGCT CGCTACGACC TGAACTTCGC CGAATACGGC
ATTCCAGGCC TGACCTTCAT GACCCGTTAT GTACGCGGTT CCGACGCCAA CGTCGCCGGC
ACCAGCAACG GCAAAGAATG GGAACGTGAC GTCGACATCA AGTACGTGCT GCAGGAAGGC
CCGGCGAAAG ACCTGAGCTT CCGCGTGCGT CAGGCCACCT ACCGTTCTTC CGATGGTGTC
TACTACGATT CCCCATCGAT CGACGAACTG CGCCTGATCG TGGAGTACCC GCTGAGCATC
CTGTAA
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| Protein sequence | MRVMKWSMIA LAVSAGTSQL AMASAQDESK GFIEDSKLSV KTRMLYFSRD FRNNEGGQSR
REETGLGFVG TFESGFTQGT VGVGVDAIGM LGLKLDSGKG RAGTGLFPTG SDGRSQDDYS
KGGGAVKFRI SDTVLKVGDQ FTALPVFATD DSRLLPEIAQ GTLITSNEIE GLTLHAGHFT
SLTAQEQTNR DSFGLKEANV VGGTYAFTDN LSTSLYYSKV EDYWRKYYAN VNWALPISDN
QGLVFDFNIY DTKSEGSAEY RAFDGDKLDN RAFSLSGAYN IGAHTFTLAY QKVTGDGDYG
YGIDGGGTIF LANSVARSDF NAEDEKSWQA RYDLNFAEYG IPGLTFMTRY VRGSDANVAG
TSNGKEWERD VDIKYVLQEG PAKDLSFRVR QATYRSSDGV YYDSPSIDEL RLIVEYPLSI
L
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