Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1203 |
Symbol | dinP |
ID | 1045968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1381248 |
End bp | 1382312 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144603 |
Product | DNA polymerase IV |
Protein accession | NP_743363 |
Protein GI | 26987938 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.46761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTGC GCAAGATCAT CCACGTCGAC TGCGATTGTT TCTACGCTGC GATCGAGATG CGTGACGACC CGCGCCTGGC CGGTCGCCCC ATGGCGGTGG GGGGCTCGCC CGACCATCGC GGGGTAATCG CCACCTGCAA CTATGAAGCG CGTGCCTATG GTGTGCGCTC GGCCATGTCA TCGCGGCATG CGCTGAAGCT TTGCCCCGAT CTGTTGATCG TCAAGCCGCG CTTCGAGGCC TACCGTGAGG CCTCGCGGGA AATCCACACG ATCTTTCGCG ATTACACGGA GCTCATCGAG CCTTTGTCCC TGGACGAAGC TTATCTGGAT GTCAGCGACA GCCAGTGGTA TTCGGGCAGC GCCACGCGCA TTGCCGAGGA TATTCGCCGG CGTGTTGCCC GCACCCTGCA TATCACCGTG TCGGCTGGCG TGGCGCCTAA CAAGTTTCTG GCCAAGATCG CCAGTGACTG GCGCAAACCC AATGGGCTGT TCGTGATTAC CCCAAATGAA GTGGAAACGT TCGTTGCAGC CTTGCCGGTG GCCAGGTTGC ATGGGGTGGG TAAGGTGACG GCCGACAAAC TGACGCGGCT GGGCATCGAA ACCTGCCTGC ATTTGCGTGA GTGGTCACGG CTGGCATTGG TGCGTGAGTT CGGCAGTTTT GGCGAGCGGT TGTGGGGGCT GGCGCGAGGG ATCGATGAGC GTGCGGTGCA TAACGACAGC CGACGCCAGT CGGTGAGTGT GGAAAACACC TACGACACCG ACCTGCCAGA CCTGGCCAGT TGCCTGGCGC GGCTGCCAGA GTTGCTGGAT AGCCTGAACG AACGCATCGC CCGAATGGAC AGCAGTTACC GGCCAGACAA ACCGTTCGTC AAGGTCAAGT TCCATGACTT CAGCCAGACC ACCATGGAGC AGGCCGGGGC GGGCCGGGAC CTGGAGAGTT ATCGGCAATT GCTGGGGCAG GCGTTCGCCC GTGGCGGCAA GCCGGTGCGC TTGCTAGGGG TAGGGGTGAG GTTGCGTGAC TTGCGGGGCG CGCATGAACA GTTGGAGCTG TTTCCGCCCA AATGA
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Protein sequence | MSLRKIIHVD CDCFYAAIEM RDDPRLAGRP MAVGGSPDHR GVIATCNYEA RAYGVRSAMS SRHALKLCPD LLIVKPRFEA YREASREIHT IFRDYTELIE PLSLDEAYLD VSDSQWYSGS ATRIAEDIRR RVARTLHITV SAGVAPNKFL AKIASDWRKP NGLFVITPNE VETFVAALPV ARLHGVGKVT ADKLTRLGIE TCLHLREWSR LALVREFGSF GERLWGLARG IDERAVHNDS RRQSVSVENT YDTDLPDLAS CLARLPELLD SLNERIARMD SSYRPDKPFV KVKFHDFSQT TMEQAGAGRD LESYRQLLGQ AFARGGKPVR LLGVGVRLRD LRGAHEQLEL FPPK
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