Gene PP_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1203 
SymboldinP 
ID1045968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1381248 
End bp1382312 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content62% 
IMG OID637144603 
ProductDNA polymerase IV 
Protein accessionNP_743363 
Protein GI26987938 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.46761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTGC GCAAGATCAT CCACGTCGAC TGCGATTGTT TCTACGCTGC GATCGAGATG 
CGTGACGACC CGCGCCTGGC CGGTCGCCCC ATGGCGGTGG GGGGCTCGCC CGACCATCGC
GGGGTAATCG CCACCTGCAA CTATGAAGCG CGTGCCTATG GTGTGCGCTC GGCCATGTCA
TCGCGGCATG CGCTGAAGCT TTGCCCCGAT CTGTTGATCG TCAAGCCGCG CTTCGAGGCC
TACCGTGAGG CCTCGCGGGA AATCCACACG ATCTTTCGCG ATTACACGGA GCTCATCGAG
CCTTTGTCCC TGGACGAAGC TTATCTGGAT GTCAGCGACA GCCAGTGGTA TTCGGGCAGC
GCCACGCGCA TTGCCGAGGA TATTCGCCGG CGTGTTGCCC GCACCCTGCA TATCACCGTG
TCGGCTGGCG TGGCGCCTAA CAAGTTTCTG GCCAAGATCG CCAGTGACTG GCGCAAACCC
AATGGGCTGT TCGTGATTAC CCCAAATGAA GTGGAAACGT TCGTTGCAGC CTTGCCGGTG
GCCAGGTTGC ATGGGGTGGG TAAGGTGACG GCCGACAAAC TGACGCGGCT GGGCATCGAA
ACCTGCCTGC ATTTGCGTGA GTGGTCACGG CTGGCATTGG TGCGTGAGTT CGGCAGTTTT
GGCGAGCGGT TGTGGGGGCT GGCGCGAGGG ATCGATGAGC GTGCGGTGCA TAACGACAGC
CGACGCCAGT CGGTGAGTGT GGAAAACACC TACGACACCG ACCTGCCAGA CCTGGCCAGT
TGCCTGGCGC GGCTGCCAGA GTTGCTGGAT AGCCTGAACG AACGCATCGC CCGAATGGAC
AGCAGTTACC GGCCAGACAA ACCGTTCGTC AAGGTCAAGT TCCATGACTT CAGCCAGACC
ACCATGGAGC AGGCCGGGGC GGGCCGGGAC CTGGAGAGTT ATCGGCAATT GCTGGGGCAG
GCGTTCGCCC GTGGCGGCAA GCCGGTGCGC TTGCTAGGGG TAGGGGTGAG GTTGCGTGAC
TTGCGGGGCG CGCATGAACA GTTGGAGCTG TTTCCGCCCA AATGA
 
Protein sequence
MSLRKIIHVD CDCFYAAIEM RDDPRLAGRP MAVGGSPDHR GVIATCNYEA RAYGVRSAMS 
SRHALKLCPD LLIVKPRFEA YREASREIHT IFRDYTELIE PLSLDEAYLD VSDSQWYSGS
ATRIAEDIRR RVARTLHITV SAGVAPNKFL AKIASDWRKP NGLFVITPNE VETFVAALPV
ARLHGVGKVT ADKLTRLGIE TCLHLREWSR LALVREFGSF GERLWGLARG IDERAVHNDS
RRQSVSVENT YDTDLPDLAS CLARLPELLD SLNERIARMD SSYRPDKPFV KVKFHDFSQT
TMEQAGAGRD LESYRQLLGQ AFARGGKPVR LLGVGVRLRD LRGAHEQLEL FPPK