Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1202 |
Symbol | |
ID | 1045883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1377630 |
End bp | 1380272 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637144599 |
Product | hypothetical protein |
Protein accession | NP_743362 |
Protein GI | 26987937 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCGC ACAATCCCGA ACCTCCGGTG CCACTCGCTA CGGCACTACC CGGTGCTGTG CAGCGCCTGC CCCTACTCGA ACGCCTGAGT CGCTACCGCC AGCCCATAGG CCTGATGGTG ACCCTGTTAC TGTTCACGAT GGCCTTGATT GCCTGCCGCC ACCTGCTGAG CGAGCTGGAC ATCTATGCCT TGCACGATGC CATGCTCAGC GTGCCCACCC AATCATTGCT GGGCGCCTTG CTGGCGACGG TGATCGGCTT TGTGATCCTG CTGGGCTACG AGTGGTCGGC CAGCCGCTAT GCGGGCGTGA AACTGCCAGC ACGCAGCCTG GCACTGGGCG GCTTCAGCGC CTTTGCCATC GGCAACGCCA TCGGCCTGTC GATGCTCTCT GGCGGCTCGG TTCGCTATCG CCTGTACGCA CGGCAAGGGC TTGGTGCTGG CGAAGTCGCA CGCATGACCG TGTTTGCCAG CCTGTCACTT GGCTGCGCGC TGCCGCCCCT GGCCGCCTTG GCGACATTGA GCAACCTGCC GGCGGCCTCG ACAGCGCTGG GGTTGGCGCC CGGCCTGCTG GCAGCTGTTG CCAGCGCCGT GCTGGTGGTG TCTGCCTTAC TGGTAATTGG CTTGTACCGC CGACGCCTGG CCGAGCAACC GGCGGCCAAT AACCTGCTCG TTCAACTGGG GCGGCGCACA CTTCGCCTGC CGGATGCACG CCTGGCGGCC CTGCAATTGC TGATTACCGC GTTGGATGTG GCGGCGGCTG CCACCGTGCT CTACCTGTTG CTGCCCGAAG CCCCTCCTTT CGGCGCGTTC GTGCTGGTGT ACCTGCTGGC CTTGGCTGCG GGCGTGCTCA GCCACGTACC GGGCGGCGTC GGGGTGTTCG AAGCGATCCT GCTGGCGGCC TTTGCCGACC AGCTCGGTGC CGCGCCGCTG GCGGCAGCCT TGCTGCTGTA CCGGCTGATC TATGTGGTAC TGCCACTGCT GCTGGCCTGC GTGTTGCTGC TGGCCAATGA AGCCCGACGC CTGCTGTTTG CGCAACAGGC CATCAAGGCC GCTTCGGGGC TGGCCGCGCC GATCCTGTCG ATCCTGGTGT TCCTGTCCGG CGTGGTGCTG CTGTTTTCCG GTGCCACGCC CGAGATAGAT ACGCGCCTGG AGCATATGGG CTTCCTGGTG CCACACCGGC TGATCGATGC CTCTCATTTC GGCGCCAGCC TGATCGGTGT GCTCTGCCTG CTGCTGGCCC AAGGCCTGCG CCGGCGCCTG TCCGCCGCCT GGCTACTGAC CACCGTGCTG TTGCTGGTCG GCGCCCTGCT GTCGCTGTTG AAGGGCTTTG ACTGGGAAGA GGCTTGCCTG CTGACCTTTA CCGCCGCCCT GCTCGCGCTG TTCCGCCGCT CGTTCTATCG CCCCAGCCGA CTGCTGGAGC TGCCCTTCTC GCCGGTGTTC CTGGTGGCCA GCGCCTGTAC GGTGGGCGCA TCAGTGTGGC TTCTGCTGTT CGCCTACCAG GATGTGCCTT ACAGCCATCA GCTGTGGTGG CAGTTCACCC TCGATGCCGA TGCGCCACGG GGCCTGCGCG CCGCCATGGG CAGTGCCTTG CTGCTGGCTG CCGTGGCACT GACGTGGCTG CTGCGTACAG CGCCACCCGT GATCCACCTG CCTGACGAAG AAGAGTTGCA ACGCGCCAAC CGTATCCTGC AGGCCTCCGA CCAGCCCGAC GGTGGCCTGG CGCTGACTGG CGACAAGGCG TTGCTGTTCC ACCCGCGTGG TAACGCGTTC CTCATGTATG CCCGGCGCGG CCGCAGCCTG GTGGCGTTGT ACGACCCGAT AGGCCCGGCC CAGGAACGCG CCGAGATGAT CTGGCAGTTC CGCGACCTGT GCGACCTGCA CCACGCACGC CCCGTGTTCT ATCAGGTGCG CGCAGAGAAC CTGCCGTTCT ACATGGACAT CGGCCTGACC GCATTGAAGC TCGGTGAAGA AGCCCGGGTC GACTTGCGCC GCTTCGACCT TGAAGCCAAA GGCAAGGAGA TGAAAGACCT GCGCTACACC TGGAACCGCG GCGGACGCGA TGGCCTGAGC CTGGAGATCC ATGAGCCCGG CCACGCCCCG CTGGCTGAGC TGAAGGAAAT TTCCGACGCC TGGCTCGGCG GCAAGAACGT GCGCGAGAAA GGCTTCTCGC TGGGGCGCTT CAGCCCAGAC TACCTGCAGC ACTTCCGCAT AGCCCTGATT CGCTTCCAGG GCCGCCCGGT AGCCTTCGCC AACCTGCTGG AAACCCATGG AAACGAACTG GCCAGCCTCG ACCTGATGCG TGCGCACCCC GAAGCGCCAA AGCTGACCAT GGAATTCATG ATGATCGGCT TGATCCTGCA TTACAAAAGC CATGACTACG GGCGTTTCAG CCTGGGCATG GTACCGCTGT CCGGCCTGCA ACCAAGGCGC GGCGCACCCT TGACCCAGCG CTTGGGTTCG CTGGTGTTCC GCCGTGGTGA GCAGCTTTAC AACTTCCAGG GGCTTCGACG CTTCAAGGAC AAGTTCCAGC CGGACTGGGA ACCCCGCTAC ATGGCCGTGC CAGCCGGGCT CGACCCGCTG GTGGCACTGG CCGACACCGC CGCCCTGATT GCAGGCGGCC TGACTGGATT GGTGAAACGC TGA
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Protein sequence | MTSHNPEPPV PLATALPGAV QRLPLLERLS RYRQPIGLMV TLLLFTMALI ACRHLLSELD IYALHDAMLS VPTQSLLGAL LATVIGFVIL LGYEWSASRY AGVKLPARSL ALGGFSAFAI GNAIGLSMLS GGSVRYRLYA RQGLGAGEVA RMTVFASLSL GCALPPLAAL ATLSNLPAAS TALGLAPGLL AAVASAVLVV SALLVIGLYR RRLAEQPAAN NLLVQLGRRT LRLPDARLAA LQLLITALDV AAAATVLYLL LPEAPPFGAF VLVYLLALAA GVLSHVPGGV GVFEAILLAA FADQLGAAPL AAALLLYRLI YVVLPLLLAC VLLLANEARR LLFAQQAIKA ASGLAAPILS ILVFLSGVVL LFSGATPEID TRLEHMGFLV PHRLIDASHF GASLIGVLCL LLAQGLRRRL SAAWLLTTVL LLVGALLSLL KGFDWEEACL LTFTAALLAL FRRSFYRPSR LLELPFSPVF LVASACTVGA SVWLLLFAYQ DVPYSHQLWW QFTLDADAPR GLRAAMGSAL LLAAVALTWL LRTAPPVIHL PDEEELQRAN RILQASDQPD GGLALTGDKA LLFHPRGNAF LMYARRGRSL VALYDPIGPA QERAEMIWQF RDLCDLHHAR PVFYQVRAEN LPFYMDIGLT ALKLGEEARV DLRRFDLEAK GKEMKDLRYT WNRGGRDGLS LEIHEPGHAP LAELKEISDA WLGGKNVREK GFSLGRFSPD YLQHFRIALI RFQGRPVAFA NLLETHGNEL ASLDLMRAHP EAPKLTMEFM MIGLILHYKS HDYGRFSLGM VPLSGLQPRR GAPLTQRLGS LVFRRGEQLY NFQGLRRFKD KFQPDWEPRY MAVPAGLDPL VALADTAALI AGGLTGLVKR
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