Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1184 |
Symbol | |
ID | 1045881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1359212 |
End bp | 1360009 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144581 |
Product | dienelactone hydrolase |
Protein accession | NP_743344 |
Protein GI | 26987919 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00788305 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACATGC GAGCCCTGCT GGCCCTGACC CTGATGTGCA GCGCCGCCCT CGCCCAAGCG GCGGTAGTGA CCCGTGAAAT TCCGTATCAG GACGACGATG GCAACCGCCT CGTCGGCTAC TACGCCTACG ATGACGCGCT GGACGGCAAA CGCCCAGGCA TCGTTGTGGT GCATGAATGG TGGGGCCTGA ACGACTATGC CAAGCGTCGT GCGAGAGATC TCGCCGCCCT GGGCTACAAG GCACTGGCCA TCGACATGTA CGGCGATGGC AAGCACACCG AGCATCCGCA GGATGCCCAG GCATTCATGG CCGCAGCGAT GAAGGACCCG GCCGCAGCAG CAGCGCGCTT CGACGCGGGC CTGGAGTTGT TGAAGAAGCA GCCGAATGTG AACAAGCATC AACTGGGCGC TGTCGGCTAC TGTTTTGGCG GCAAGGTGGT GCTCGATGCC GCACGCCGGG GAGAAAAGCT CGATGGCGTG GTGAGCTTCC ATGGCGCACT GGCCACCCAG ACCCCGGCAA AACCTGGCGT GGTGCGGGCC GATATCCTGG TCGAGCATGG TGCGGCGGAC AGCATGGTCA CCCCACAGCA GGTGGAGGCA TTTAAGGCCG AGATGGATGC GGCCAAGGTC AACTACCAGT TCGTCAGTAT TGAAGGGGCC AAGCACGGGT TCACCAACCC CGATGCCGAT CGGCTGAGCC ACGGTGAACA TGGGGGGCCG GACATTGGCT ATAACAAGGC AGCGGACGAG CGTTCCTGGG CAGATATGCA GGCGTTCTTC AAGAAGGTGT TCAAATAA
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Protein sequence | MNMRALLALT LMCSAALAQA AVVTREIPYQ DDDGNRLVGY YAYDDALDGK RPGIVVVHEW WGLNDYAKRR ARDLAALGYK ALAIDMYGDG KHTEHPQDAQ AFMAAAMKDP AAAAARFDAG LELLKKQPNV NKHQLGAVGY CFGGKVVLDA ARRGEKLDGV VSFHGALATQ TPAKPGVVRA DILVEHGAAD SMVTPQQVEA FKAEMDAAKV NYQFVSIEGA KHGFTNPDAD RLSHGEHGGP DIGYNKAADE RSWADMQAFF KKVFK
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