| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1179 |
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| Symbol | nrdA |
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| ID | 1045795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1352495 |
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| End bp | 1355374 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144576 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | NP_743339 |
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| Protein GI | 26987914 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.492267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0911019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCG ACACGACTCG CGAGAACCCG CAGGCCCAGG TGCCGCAGGC CGCCGATTCC
AACCAGGATC TGGCTGCCAC CGCCCCCGGC CAACTGCGCG TGATCAAGCG TAACGGCACT
GTCGTCCCTT ACACCGACGA CAAGATCACC GTCGCCATCA CCAAGGCGTT CCTCGCAGTT
GAAGGCGGCA CCGCCGCCGC TTCGTCGCGC ATCCACGACA CCGTCGCGCG CCTGACCGAG
CAGGTTACCG CAACGTTCAA GCGTCGCATG CCATCGGGTG GCACCATCCA CATCGAAGAA
ATCCAGGACC AGGTCGAACT GGCCCTGATG CGCGCCGGCG AGCAGAAAGT CGCCCGCGAC
TACGTGATCT ACCGTGACCA GCGCGCCAAG GAGCGTGCCA CCCGCGCCAA CACCGACGCC
GTGGTCGAGC CGCACCCGAG CATCCGCATC ACCCTGGCCG ACGGCAGCCT GGCGCCGCTC
GACATGGCCC GCCTGAACAC CATCATCAGC GAAGCCTGCG AAGGCCTGGC CGAAGTCGAT
GGCGACCTGA TCCAGCGCGA AACCCTGAAG AACCTGTACG ACGGCGTGGC CATCAAGGAC
GTCAACACCG CCCTGGTGAT GACCGCCCGT ACCCTGGTGG AGCGCGAGCC GAACTACTCG
TTCGTTACCG CCCGCCTGCT GATGGACACC CTGCGCGCCG AAGGCCTGGG CTTCCTGAAT
GTAGCCGACA GCGCCACCCA CCACGAGATG GCTGACCTGT ACGCCAAGGC CCTGCCGGCC
TACGTCGCCA AAGGTATCGA GTTCGAGCTG CTGAACCCGG CCCTGGCCGA CTTCGACCTG
GAAAAACTGG GCAAGGCGAT CAACCACGAG CGCGACCAGC AGTTTACCTA CCTGGGCCTG
CAGACCCTGT ACGACCGCTA CTTCATCCAC AAGGATGGCG TGCGCTTCGA GCTGCCGCAG
GTTTTCTTCA TGCGTGTGGC CATGGGCCTG GCGCTGGAAG AAAAAGACAA GGAAGCCCGT
GCGATCGAGT TCTACAACCT GTTGTCGTCG TTCGACTACA TGGCCTCGAC CCCGACCCTG
TTCAACGCCG GCACCCTGCG CCCGCAGCTG TCCAGCTGCT ACCTGACCAC CGTGCCGGAC
GACCTGTCGG GCATCTACCA CGCGATCCAC GACAACGCCA TGCTGTCGAA ATTCGCCGGT
GGCCTGGGCA ACGACTGGAC CCCTGTGCGC GCACTGGGCT CTTACATCAA GGGCACCAAC
GGCAAGTCGC AGGGCGTCGT ACCGTTCCTG AAAGTGGTCA ACGACACCGC CGTTGCGGTC
AACCAGGGTG GCAAGCGCAA AGGCGCTGTA TGTGCCTACC TGGAAACCTG GCACCTGGAC
ATCGAAGAAT TCATCGAGCT GCGCAAGAAC ACCGGTGATG ACCGCCGTCG TACCCACGAC
ATGAACACCG CCAACTGGAT CCCTGACCTG TTCATGAAGC GTGTCTTCGA TGACGGCAAG
TGGACCCTGT TCTCGCCTTC GGAAGTGCCA GACCTGCACG ACCTGACCGG CAAGGCCTTC
GAAGAGCGCT ACGAGTACTA CGAAGCCCTG ACCGAGTACA ACAAGATCAA GGTGTTCAAG
ACCGTTCAGG CCAAAGACCT GTGGCGCAAG ATGCTGTCGA TGCTGTTCGA GACCGGCCAC
CCATGGCTGA CCTTCAAGGA CCCGTGCAAC CTGCGTTCGC CGCAGCAGCA CGTGGGCGTG
GTCCACAGCT CGAACCTGTG CACCGAAATC ACCCTGAACA CCAACAAGGA CGAGATCGCG
GTCTGCAACC TGGGCTCGAT CAACCTGCCG AACCACATCG TCGATGGCAA GCTGGACACC
ACCAAGCTGC AACGCACCGT GAACACCGCC GTGCGCATGC TCGACAACGT GATCGACATC
AACTACTACT CGGTGCCGCA AGCGCGTAAC TCGAACTTCA AGCACCGGCC GGTCGGCCTG
GGCATCATGG GCTTCCAGGA TGCGCTGTAC CTGCAGCACA TTCCTTACGG CTCCGATGCT
GCCGTCGAGT TTGCCGACAA GTCGATGGAA GCGGTCAGCT ACTACGCCAT CCAGGCTTCG
TGCGACCTGG CCGATGAACG CGGCGCCTAC GAGACCTTCC AGGGTTCGCT ATGGTCCAAG
GGCATTCTGC CGCTGGATTC GCAACAGATC CTGATCGAGG CCCGTGGCCA GAAGTACATC
GACGTCAACC TGGAAGAAAC CCTGGACTGG GCGCCGGTAC GTGCCCGCGT ACAGAAAGGT
ATTCGTAACT CGAACATCAT GGCCATCGCG CCAACCGCGA CCATCGCCAA CATCACCGGC
GTGTCGCAGT CGATCGAGCC TACCTACCAG AACCTGTACG TGAAATCGAA CCTGTCGGGC
GAATTCACCG TGATCAACCC GTACCTGGTT CGCGACCTCA AGGCCCGCGA CCTGTGGGAC
TCGGTCATGA TCAACGACCT GAAGTACTAC GACGGTTCGG TACAGCAGAT CGAGCGTATC
CCGCAAGAGC TGAAAGACCT GTACGCCACT GCGTTCGAAG TCGAGACCAA GTGGATTGTC
GACGCTGCTT CCCGTCGCCA GAAGTGGATC GACCAGGCGC AGTCGCTGAA CCTGTACATC
GCGGGTGCAT CGGGCAAGAA GCTGGACGTG ACCTACCGCA TGGCCTGGTA CCGTGGCCTG
AAAACCACCT ACTACCTCCG TGCCCTGGCC GCCACCAGCA CCGAGAAGTC GACCATCAAC
ACCGGCAAGC TCAACGCCGT TTCCAGCGGT GGCGACAGCG CCCCAGTCCA GGCAGCCGGC
CCTGCGCCAG TGCCAAAGGC CTGCGCGATC GACGAGCCTG ACTGCGAAGC CTGCCAGTAA
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| Protein sequence | MQTDTTRENP QAQVPQAADS NQDLAATAPG QLRVIKRNGT VVPYTDDKIT VAITKAFLAV
EGGTAAASSR IHDTVARLTE QVTATFKRRM PSGGTIHIEE IQDQVELALM RAGEQKVARD
YVIYRDQRAK ERATRANTDA VVEPHPSIRI TLADGSLAPL DMARLNTIIS EACEGLAEVD
GDLIQRETLK NLYDGVAIKD VNTALVMTAR TLVEREPNYS FVTARLLMDT LRAEGLGFLN
VADSATHHEM ADLYAKALPA YVAKGIEFEL LNPALADFDL EKLGKAINHE RDQQFTYLGL
QTLYDRYFIH KDGVRFELPQ VFFMRVAMGL ALEEKDKEAR AIEFYNLLSS FDYMASTPTL
FNAGTLRPQL SSCYLTTVPD DLSGIYHAIH DNAMLSKFAG GLGNDWTPVR ALGSYIKGTN
GKSQGVVPFL KVVNDTAVAV NQGGKRKGAV CAYLETWHLD IEEFIELRKN TGDDRRRTHD
MNTANWIPDL FMKRVFDDGK WTLFSPSEVP DLHDLTGKAF EERYEYYEAL TEYNKIKVFK
TVQAKDLWRK MLSMLFETGH PWLTFKDPCN LRSPQQHVGV VHSSNLCTEI TLNTNKDEIA
VCNLGSINLP NHIVDGKLDT TKLQRTVNTA VRMLDNVIDI NYYSVPQARN SNFKHRPVGL
GIMGFQDALY LQHIPYGSDA AVEFADKSME AVSYYAIQAS CDLADERGAY ETFQGSLWSK
GILPLDSQQI LIEARGQKYI DVNLEETLDW APVRARVQKG IRNSNIMAIA PTATIANITG
VSQSIEPTYQ NLYVKSNLSG EFTVINPYLV RDLKARDLWD SVMINDLKYY DGSVQQIERI
PQELKDLYAT AFEVETKWIV DAASRRQKWI DQAQSLNLYI AGASGKKLDV TYRMAWYRGL
KTTYYLRALA ATSTEKSTIN TGKLNAVSSG GDSAPVQAAG PAPVPKACAI DEPDCEACQ
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