| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1145 |
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| Symbol | hepA |
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| ID | 1045495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1311808 |
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| End bp | 1314654 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637144540 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | NP_743306 |
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| Protein GI | 26987881 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.286627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGC AGTATCAACC GGGGCAACGC TGGATCAGCG ACAGCGAAGC AGAGCTCGGC
CTGGGTACCA TCCTGGCGCA GGATGGCCGC CTGTTGACCG TGCTCTACCC GGCCACTGGC
GACACCCGCC AGTATTCCCT GCGCAATGCG CCGCTGACCC GCGTGCGCTT CTCGCCAGGT
GACCAGATCA CCCACTTCGA GGGCTGGAAG CTGACCGTGC GCGAGGTCGA GGACATCGAC
GGGCTGATGG TCTACCACGG CCTGGACGGG CAGAACCAGC CTCGCACCCT GCCTGAAACC
CAGTTGTCGA ACTTCATTCA GTTCCGCCTG GCCAGCGACC GCCTGTTCGC CGGGCAGATA
GACCCACTGT CGTGGTTCAG CCTGCGCTAC AACACCCTGC AGCACACCAG CAAGCAGATG
CAGTCGGCAC TGTGGGGGTT GGGCGGCTGC CGCGCACAGC CCATCGCCCA CCAACTGCAC
ATTGCCCGCG AAGTCGCCGA CCGCAGCGCC CCGCGCGTTC TGCTGGCCGA CGAAGTGGGC
CTGGGCAAAA CCATCGAAGC CGGCCTGGTC ATTCACCGCC AACTGCTGTC GGGTCGCGCC
AGCCGCGTAC TGATCCTGGT GCCGGAAAAC CTCCAGCACC AGTGGCTGGT GGAAATGCGC
CGGCGCTTCA ATCTGCAAGT GGCGCTGTTC GACGCCGAGC GCTTCATCGA AAGCGACGCC
AGCAACCCGT TCGAGGATGC CCAACTGGCG TTGGTTGCCC TGGAGTGGCT GGTCGATGAC
GAAAAGGCCC AGGACGCGCT GTTCGCCGCT GGCTGGGACC TGCTGGTAGT CGACGAAGCC
CACCACCTGG TCTGGCACGA AGACCAGGTC AGCGCCGAAT ACGGCCTGGT CGAGCAACTG
GCCCAAGTGA TTCCGGGCGT ACTGTTGCTG ACCGCCACCC CCGAGCAGCT GGGCCAGGAC
AGCCACTTCG CCCGCCTGCG CCTACTCGAC CCCAACCGTT TTCACGACCT GGCCGCTTTC
CGCGCCGAAA GCGAGCACTA CCGCCCGGTA GCCGAGGCGG TGCAGGAACT GCTCGACGAG
GGCCGTCTGT CGCCCAAGGC CCACGCCACC ATCCTGGGCT TCCTGGGTGC CGAAGGCGAA
GCCCTGCTGG CAGCGGTCAG CGACGGCGAC ACCCAGGCCA GCGCCCGGCT GATTCGCGAA
CTGCTGGATC GCCACGGCAC CGGACGCGTG CTGTTCCGTA ACACCCGTGC GGCGATTCAG
GGCTTCCCCG AGCGCCAGTT GCACCCCTAC CCGCTGCCCA CGCCCGAGCA ATACCGCGAC
CTGCCAGCCG GCGAGCACGC CGAGCTGTAC CCGGAAGTTG CCTTCCAGGC CCAGGGTGAA
GTGGCCGATG ACGAGCGCTG GTGGCGTTTC GACCCACGCG TCGACTGGCT GATCGACACC
CTGAAGATGC TCAAGCGCAC CAAAGTGCTG GTGATCTGCG CCCACGCCGA AACCGCCATG
GACCTGGAAG ACGCCCTGCG CGTGCGCTCC GGCATCCCGG CCTCGGTGTT CCATGAAGGC
ATGAGCATCC TCGAGCGCGA CCGTGCCGCT GCCTACTTTG CCGATGAAGA GTTTGGCGCC
CAGGTGCTGA TCTGCTCGGA AATCGGCAGC GAAGGCCGCA ACTTCCAGTT CGCTCATCAC
CTGGTGATGT TCGACCTGCC GGCGCACCCC GACCTGCTCG AACAGCGCAT CGGCCGCCTT
GACCGGATCG GCCAGAAGCA CACTATCCAG TTGCACATCC CGTACCTGCA GGACAGCCCG
CAAGAGCGCC TGTTCCAGTG GTACCACGAA GGGCTCAACG CCTTCCTCAA CACCTGCCCC
ACCGGCAATG CCCTGCAGCA CCAGTTCGGC CCACGCCTGC TGCCGCTGCT CGAAGGCGGC
GAAAACAAGG CCTGGGATAC CCTGGTGGCC GACGCCCGCA GCGAACGCGA ACGCCTGGAA
GCCGAACTGC ACACTGGCCG TGACCGCCTG CTGGAACTCA ATTCCGGCGG CGCCGGCGAA
GGTCAGGCGC TGGTCGAGGC CATTCTCGAA CAGGACGACC AGTTCGCCCT GCCGATCTAC
ATGGAAACCC TGTTCGACGC CTTCGGCATC GACAGCGAAG ACCATTCCGA GAATGCACTG
ATCCTCAAGC CGAGCGAGAA GATGCTCGAT GCCAGCTTCC CGCTGGGCGA CGATGAAGGC
GTGACCATCA CCTACGACCG TGGCCAGGCG CTGTCACGCG AGGACATGCA ATTCCTCACC
TGGGAGCACC CGATGGTACA GGGCGGCATG GATCTGGTGC TGTCAGGCTC GATGGGCAAC
ACCGCCGTGG CGTTGATCAA GAACAAAGCG CTCAAACCAG GCACTGTCCT GCTTGAACTG
CTGTTCGTCA GCGAGGTGGT GGCACCCCGT AGCCTGCAAC TGGGCCGCTA CCTGCCGCCA
GCGGCACTGC GCTGCCTGCT CGACGCCAAT GGCAACGACC TGGCGTCACG CGTTGCTTTC
GAAACCCTCA ACGACCAGCT CGAGAGTGTA CCGCGCGCCA GCGCCAACAA GTTCGTCCAG
GCCCAGCGCG ATGTGCTGGC CAAGCGTATC AGTGGCGGCG AGGAGAAGAT CCTGCCGGCC
CACAACGAGC GCGTGGCCGA AGCCCAGCGC CGCCTGGCAG CCGAGGCCGA CGAAGAGCTG
GCGCGCCTGG TGGCATTGCA AGCGGTCAAC CCAAGTGTGC GTGACAGCGA AATCGACGCC
CTGCGCAAGC GGCGCGAAGA TGGCCTGGCA ATGCTGGAGA AGGCCGCCCT GCGCCTGGAA
GCCATTCGCG TGCTGGTGGC TGGCTAG
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| Protein sequence | MAQQYQPGQR WISDSEAELG LGTILAQDGR LLTVLYPATG DTRQYSLRNA PLTRVRFSPG
DQITHFEGWK LTVREVEDID GLMVYHGLDG QNQPRTLPET QLSNFIQFRL ASDRLFAGQI
DPLSWFSLRY NTLQHTSKQM QSALWGLGGC RAQPIAHQLH IAREVADRSA PRVLLADEVG
LGKTIEAGLV IHRQLLSGRA SRVLILVPEN LQHQWLVEMR RRFNLQVALF DAERFIESDA
SNPFEDAQLA LVALEWLVDD EKAQDALFAA GWDLLVVDEA HHLVWHEDQV SAEYGLVEQL
AQVIPGVLLL TATPEQLGQD SHFARLRLLD PNRFHDLAAF RAESEHYRPV AEAVQELLDE
GRLSPKAHAT ILGFLGAEGE ALLAAVSDGD TQASARLIRE LLDRHGTGRV LFRNTRAAIQ
GFPERQLHPY PLPTPEQYRD LPAGEHAELY PEVAFQAQGE VADDERWWRF DPRVDWLIDT
LKMLKRTKVL VICAHAETAM DLEDALRVRS GIPASVFHEG MSILERDRAA AYFADEEFGA
QVLICSEIGS EGRNFQFAHH LVMFDLPAHP DLLEQRIGRL DRIGQKHTIQ LHIPYLQDSP
QERLFQWYHE GLNAFLNTCP TGNALQHQFG PRLLPLLEGG ENKAWDTLVA DARSERERLE
AELHTGRDRL LELNSGGAGE GQALVEAILE QDDQFALPIY METLFDAFGI DSEDHSENAL
ILKPSEKMLD ASFPLGDDEG VTITYDRGQA LSREDMQFLT WEHPMVQGGM DLVLSGSMGN
TAVALIKNKA LKPGTVLLEL LFVSEVVAPR SLQLGRYLPP AALRCLLDAN GNDLASRVAF
ETLNDQLESV PRASANKFVQ AQRDVLAKRI SGGEEKILPA HNERVAEAQR RLAAEADEEL
ARLVALQAVN PSVRDSEIDA LRKRREDGLA MLEKAALRLE AIRVLVAG
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