| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1132 |
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| Symbol | nhaA |
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| ID | 1045300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1295052 |
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| End bp | 1296245 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637144527 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | NP_743293 |
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| Protein GI | 26987868 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.422688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.012742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGGCC TACAGCCCGT GCGTAGCCTG TTTACCCGTT TCTTCCAGCT CGAAGCCGCC
AGTGGCCTGC TGTTGATCGC CGCCGCCGTT CTGGCCCTGA TCATCAACAA CTCGCCACTG
TCCTACCTGT ACGGCGGCTT GCTCGAGGTA CCCGTCGCCG TCCAGGTCGG CGCGCTGAAC
ATCGCCAAGC CATTGCTACT GTGGATCAAC GACGGCCTGA TGGCCCTGTT CTTCCTGCTC
ATCGGCCTGG AGGTCAAACG CGAGGTGGTC GACGGTCACC TGTCCAAGCC CTCACAAGTG
ATTCTGCCTG CCACCGCAGC CGTGGGCGGC ATGGTGGTGC CAGCGCTGAT CTACTGGTTC
ATCAACCGTG ACAACCCTGC AGCCGTGGCA GGCTGGGCGA TCCCTACCGC CACCGACATC
GCCTTCGCCC TCGGCGTCCT GGCCCTGCTC GGCAAGCGCG TACCAGTGTC ACTGAAGTTG
TTCCTGATGA CCCTGGCGAT CATCGACGAC CTGGGTGCGA TCATTGTCAT CGCCCTGTTC
TACTCCGGCA CCCTGTCGAG TGTGTCGCTG CTGCTGGCTG CGGCCTGTCT GCTGGTGCTG
GTGGCGATGA ACCGGCTTGG CGTGATCAAG CTTGGCCCCT ACATGATCGT TGGCCTGATC
CTGTGGGTTT GTGTGCTCAA GAGTGGCGTG CATGCCACCT TGGCCGGTGT CGCGCTGGCC
TTTTGCATCC CGCTGCGTAC ACGCAATGCT GAATCGTCGC CGCTGCTGGC GCTGGAACAT
GCCCTGCACC CCTGGGTGGC CTATGCCATC CTGCCAATTT TCGCCTTTGC CAATGCCGGC
GTTTCGCTGG CAGGCATGAC CGTAGACAGC TTCACCCACC CCGTGCCGAT GGGCATCACG
ATCGGCCTGT TGCTGGGCAA GACCGTGGGG GTTTTCGGCC TGACCTGGGT GGCGGTCAAG
CTGCGCCTAG CCGCGCTGCC TGCGGGCGCT GGTTGGGGGC AAATTCTGGG GGTGGCGATA
CTCTGCGGCA TTGGCTTTAC CATGAGCCTG TTCGTAGGCT CGCTCGCCTT CGCCCCGGGT
AGCAGTGAGT ACGCCGGCAT GGACCGCATG GGCATTCTTA CTGGTTCGTT CTTTGCTGCG
GTGATCGGCT ACGCCGTCAC CGCAATGGCC AGCCGCAAAA CCAGCATTGC CTGA
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| Protein sequence | MEGLQPVRSL FTRFFQLEAA SGLLLIAAAV LALIINNSPL SYLYGGLLEV PVAVQVGALN
IAKPLLLWIN DGLMALFFLL IGLEVKREVV DGHLSKPSQV ILPATAAVGG MVVPALIYWF
INRDNPAAVA GWAIPTATDI AFALGVLALL GKRVPVSLKL FLMTLAIIDD LGAIIVIALF
YSGTLSSVSL LLAAACLLVL VAMNRLGVIK LGPYMIVGLI LWVCVLKSGV HATLAGVALA
FCIPLRTRNA ESSPLLALEH ALHPWVAYAI LPIFAFANAG VSLAGMTVDS FTHPVPMGIT
IGLLLGKTVG VFGLTWVAVK LRLAALPAGA GWGQILGVAI LCGIGFTMSL FVGSLAFAPG
SSEYAGMDRM GILTGSFFAA VIGYAVTAMA SRKTSIA
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