| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1109 |
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| Symbol | |
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| ID | 1045226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1268089 |
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| End bp | 1269429 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144504 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | NP_743270 |
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| Protein GI | 26987845 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.176588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCCT GCAGCCTTCA TCACCTTTTG AAACAACGCC TGGATGCAGG CGAGTGGTTG
CCCGGGCAAC GCATGCCCTC CATCCGCAAG CTGACCGCTG CAGTGGACTT CAGTTACCAC
GACGTCGTGT CGGCCTACGC CCAGCTGGTC AGCGAAGGTG TGTTGACGGC ATCACCCGGG
CGAGGCTACT TCGTGGCAAA CCGCGCCCGG CAAACCAGCG TGATTCACGA ACCCGAATGC
ATGGCCGGCG ACCCGCTGTT CCGGCTGCTG CAGGGCGGCC AGCACTTCAC CAAGCTGGGC
AGCGGCTGGC TGCCCCCAGC GTGGCGCGAC ACCGAACTGC TGGCCAAGGC GATTCGTCGC
ACGGCGCGGC TGGAGCAGAG CTCGCTGGCA GAGTACGGCG ACATCCAGGG ATACCTGCCC
ATGCGCAAAC AGCTGTGCGT GCACATGAAA CGGCTAACCC GTGTCGAAGT CCGCCCCAAC
CAGTTGCTGA CCACACTGGG GGCCACGCAA GGCCTGGACC TGGTTGCACG GTTGCTGATC
AAACCGGGCG ACCACGTGTT CGTCGACGAG CCGGGCAACG GCAACCTGAT CAAGCTGATC
CAACTGGCTG GCGGACACGT CGTCGGCATT CGGCGGACCC AGGACGGGCC GGACGTGGAA
GAAATGAGAA GCCACCTGGC CAGGCACAAG GTCAAGGCGT TTTTCTGCAA CAGCACCTTC
CACAACCCGA CCGGCAGCAA CATCAGCCCG CACAACGCCT TCAGCGTCCT GCGCCTGGCG
GTGGAGCACG AGTTCTTCGT GGTCGAGGAC GACGTTTATG GGGACTTCAG CCCTGCTGTG
CGCCAGACCT TTGCCGAGCT GGACAACCTT GACCGGGTTA TCTACATCGG CAGCTTCTCC
AAATGCCTGT CGGCCTCGCT GCGCGTGGGG TTCATTGCCT GCTCGCAAGA CCTGATCGAG
CCGCTCACAC GCCTTAAACT GCTGACCTGC GTCGCTGTCC CCGCGTTTTG CGAACGCTTC
GTCAACACCA TATTGTCGGA TGGCACGTAT GCCCGGCACA TGAAAGACGT GCAGCAGCGC
CTGATCCGCC AGCAAGTGCA AACCCAACGC TTGCTGCTCG AGCGCGGCTG GCAGTTCGAC
ATTGCACCGC AAGGGGGTAT GTTCCTCTGG GTATACCACC CGGACCTGCC CGACCTGCAA
CCTTTCGTGC GTAAACTGGA GCAACACAAG ATCCTGCTGA TGCCCGGCTC TGCATTCGCG
GTGAGCCGTG ACTACCAACG CTACACGCGC ATCAATTGCA CGCATTTTTC CGACGCCTTG
GCCGAGCACT TCGAGGTTTG A
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| Protein sequence | MIPCSLHHLL KQRLDAGEWL PGQRMPSIRK LTAAVDFSYH DVVSAYAQLV SEGVLTASPG
RGYFVANRAR QTSVIHEPEC MAGDPLFRLL QGGQHFTKLG SGWLPPAWRD TELLAKAIRR
TARLEQSSLA EYGDIQGYLP MRKQLCVHMK RLTRVEVRPN QLLTTLGATQ GLDLVARLLI
KPGDHVFVDE PGNGNLIKLI QLAGGHVVGI RRTQDGPDVE EMRSHLARHK VKAFFCNSTF
HNPTGSNISP HNAFSVLRLA VEHEFFVVED DVYGDFSPAV RQTFAELDNL DRVIYIGSFS
KCLSASLRVG FIACSQDLIE PLTRLKLLTC VAVPAFCERF VNTILSDGTY ARHMKDVQQR
LIRQQVQTQR LLLERGWQFD IAPQGGMFLW VYHPDLPDLQ PFVRKLEQHK ILLMPGSAFA
VSRDYQRYTR INCTHFSDAL AEHFEV
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