Gene PP_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1087 
Symbol 
ID1045169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1245644 
End bp1246597 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content64% 
IMG OID637144482 
ProductOmpA family outer membrane protein 
Protein accessionNP_743248 
Protein GI26987823 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.763305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCCGC CCGTGCGCCA GCGTTACCTA GCCCTGTTGA CCCTGTTCGC CAGCCTGCCG 
GCCGGCGCAC TGACTTTCCA GACGCGCATG GAGAACATTG CCTGGAAGGT CGAGGGTGAC
CAGTTCGAGT GTCGTCTGAG CCAGCCGATC GAAGGTTTCG GCAGCGGTAC GTTCGTGCGT
CGGGCAGGCG AGCAGCCGGT GTTTCAGCTG CGGTCGGACA GCAACGCACT GGGTGCCGGC
ACCGCCAGCC TGCTGGCTGC GGCAGCGCCG TGGCAACCTG GGCGTGGCGA TATCAACTTG
GGCAATGTGC GAATGGCCCG CAGTGGCGTG CTGTTCAGCT CCTCCCAAGG GCAGGCCAGC
CGGCTGATCA ACGGCTTGCT CGACGGGCGT AGCACCGTTG TGCGCAACTA CACCGGTGAG
GCGGGCAGGC CGATGGAGGT GCGTGTGCTG CCGGTCAGCT TCGCCAAAGC CTACAATGAC
TATCAGGTCT GTGCTGGCAA GCTGTTGCCG ATGAACTACG ACCAGGTGCG CCAGACACAG
GTGGGTTTCC CCGGGGGCGG TATCGAGCTG GACGCAGCAG CCAAGGCGCG GCTGGACGTG
ATCCTCGATT ACATGAAAGC CGACCCGACG GTGAACCATG TCGAGCTCAA TGGGCATTCC
GACAACAGTG GCAACCGCCT TACCAACCGC GACCTGTCGC GCCGTCGGGC ATTGGCCGTG
GCCGATTATT TCAAGGCTAA CGGTGTGCCG GAAGAGCAGA TCACTGTGCG CTTCCATGGC
GAGCGTTATC CGCTCGCGAA GAACAACAGT GCGTCGAATC GGGCGCGTAA TCGGCGGGTG
AATATCGAGC TGGATCGGGT GGCGGTGGTT GAGAAACCGG TGGAAAAGCC GGTTGAGCAA
GCGGCGCCGG GTGTTGCACC TGCCTCGGGC GTCCCGGGGG CGAAGGCGCC CTGA
 
Protein sequence
MEPPVRQRYL ALLTLFASLP AGALTFQTRM ENIAWKVEGD QFECRLSQPI EGFGSGTFVR 
RAGEQPVFQL RSDSNALGAG TASLLAAAAP WQPGRGDINL GNVRMARSGV LFSSSQGQAS
RLINGLLDGR STVVRNYTGE AGRPMEVRVL PVSFAKAYND YQVCAGKLLP MNYDQVRQTQ
VGFPGGGIEL DAAAKARLDV ILDYMKADPT VNHVELNGHS DNSGNRLTNR DLSRRRALAV
ADYFKANGVP EEQITVRFHG ERYPLAKNNS ASNRARNRRV NIELDRVAVV EKPVEKPVEQ
AAPGVAPASG VPGAKAP