Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1087 |
Symbol | |
ID | 1045169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1245644 |
End bp | 1246597 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144482 |
Product | OmpA family outer membrane protein |
Protein accession | NP_743248 |
Protein GI | 26987823 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.763305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCCGC CCGTGCGCCA GCGTTACCTA GCCCTGTTGA CCCTGTTCGC CAGCCTGCCG GCCGGCGCAC TGACTTTCCA GACGCGCATG GAGAACATTG CCTGGAAGGT CGAGGGTGAC CAGTTCGAGT GTCGTCTGAG CCAGCCGATC GAAGGTTTCG GCAGCGGTAC GTTCGTGCGT CGGGCAGGCG AGCAGCCGGT GTTTCAGCTG CGGTCGGACA GCAACGCACT GGGTGCCGGC ACCGCCAGCC TGCTGGCTGC GGCAGCGCCG TGGCAACCTG GGCGTGGCGA TATCAACTTG GGCAATGTGC GAATGGCCCG CAGTGGCGTG CTGTTCAGCT CCTCCCAAGG GCAGGCCAGC CGGCTGATCA ACGGCTTGCT CGACGGGCGT AGCACCGTTG TGCGCAACTA CACCGGTGAG GCGGGCAGGC CGATGGAGGT GCGTGTGCTG CCGGTCAGCT TCGCCAAAGC CTACAATGAC TATCAGGTCT GTGCTGGCAA GCTGTTGCCG ATGAACTACG ACCAGGTGCG CCAGACACAG GTGGGTTTCC CCGGGGGCGG TATCGAGCTG GACGCAGCAG CCAAGGCGCG GCTGGACGTG ATCCTCGATT ACATGAAAGC CGACCCGACG GTGAACCATG TCGAGCTCAA TGGGCATTCC GACAACAGTG GCAACCGCCT TACCAACCGC GACCTGTCGC GCCGTCGGGC ATTGGCCGTG GCCGATTATT TCAAGGCTAA CGGTGTGCCG GAAGAGCAGA TCACTGTGCG CTTCCATGGC GAGCGTTATC CGCTCGCGAA GAACAACAGT GCGTCGAATC GGGCGCGTAA TCGGCGGGTG AATATCGAGC TGGATCGGGT GGCGGTGGTT GAGAAACCGG TGGAAAAGCC GGTTGAGCAA GCGGCGCCGG GTGTTGCACC TGCCTCGGGC GTCCCGGGGG CGAAGGCGCC CTGA
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Protein sequence | MEPPVRQRYL ALLTLFASLP AGALTFQTRM ENIAWKVEGD QFECRLSQPI EGFGSGTFVR RAGEQPVFQL RSDSNALGAG TASLLAAAAP WQPGRGDINL GNVRMARSGV LFSSSQGQAS RLINGLLDGR STVVRNYTGE AGRPMEVRVL PVSFAKAYND YQVCAGKLLP MNYDQVRQTQ VGFPGGGIEL DAAAKARLDV ILDYMKADPT VNHVELNGHS DNSGNRLTNR DLSRRRALAV ADYFKANGVP EEQITVRFHG ERYPLAKNNS ASNRARNRRV NIELDRVAVV EKPVEKPVEQ AAPGVAPASG VPGAKAP
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