Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1084 |
Symbol | |
ID | 1045103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1243107 |
End bp | 1243709 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637144479 |
Product | anti-oxidant AhpCTSA family protein |
Protein accession | NP_743245 |
Protein GI | 26987820 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.526304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTAC TCGTTGGTAA GAAAGCCCCC GATTTCACCG TTCCGGCCGT GCTGGGCAAT GGCGAGATCG TCGATAGCTT CAACCTGGCC TCGGCCATCA AGGGCAAGTA CGGCCTGGTG TTCTTCTACC CGCTGGACTT CACCTTCGTC TGCCCGTCCG AGCTGATCGC CCTGGACAAC CGCATCCCTG ACTTCCAGGC GCGCAACGTG GAAGTGATCG GTGTGTCGAT CGACTCGCAC TTCACCCACA ACGCCTGGCG TAACACCCCG GTCAACAACG GCGGCATCGG TCAGGTGAAG TACACCCTGG CTGCCGACAT GACCCACGAA ATCTGCAAAG CCTACGACGT CGAGTCCGAA GGCGGCGTGG CCTTCCGTGG TGCCTTCCTG ATCGATACCA ACGGTGTTGT CCGTTCGCAG ATCGTCAACG ACCTGCCCCT GGGCCGTAAC ATGGACGAGC TGCTGCGCCT GGTTGACGCT CTGCAGTTCC ACGAAGAGCA CGGCGAAGTG TGCCCTGCCA ACTGGAAAAA AGGCGACAAG GGCATGAACG CTTCGCCTGA AGGCGTTGCT GCCTACCTGA GCGAGAACGC TGGCAAGCTG TAA
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Protein sequence | MSVLVGKKAP DFTVPAVLGN GEIVDSFNLA SAIKGKYGLV FFYPLDFTFV CPSELIALDN RIPDFQARNV EVIGVSIDSH FTHNAWRNTP VNNGGIGQVK YTLAADMTHE ICKAYDVESE GGVAFRGAFL IDTNGVVRSQ IVNDLPLGRN MDELLRLVDA LQFHEEHGEV CPANWKKGDK GMNASPEGVA AYLSENAGKL
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