| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1061 |
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| Symbol | |
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| ID | 1044425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1212652 |
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| End bp | 1216956 |
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| Gene Length | 4305 bp |
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| Protein Length | 1434 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637144456 |
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| Product | DEAD/H associated domain protein |
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| Protein accession | NP_743222 |
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| Protein GI | 26987797 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC CCGCCAAACA CCACCCGGTG CTCGAGCTGT TCCATCCTGC CGTCAGCACC
TGGTTCCGCC GCCACTTCGC CACGGTCACC GATGCCCAGG CACAGGCCTG GCCGTTGATC
CACGCCGGGC AATCCATGCT GCTGGCCGCG CCGACCGGCT CAGGCAAGAC CCTGAGCGCT
TTTCTGGCCG TGCTTGATGA GCTGCTGCGT GAAGGCATGA AGCACCAGGG CGAACTGCCC
GCACAGACCC TGGTGATCTA CGTTTCACCT CTGAAGGCCC TGTCCAATGA CATTCGTCTG
AACCTGCAGG CCCCGCTCGA AGGCATCAGC CAAGCCATTG CAGAGCAAGG CCTGAACGCC
CCACGCATCA CCACGGCGGT ACGCACCGGC GATACGCCGC AGAAGGAACG CGCCGCCATG
CGCAAGCTGG CCCCGCACAT TCTGGTGACG ACCCCCGAAT CGCTTTACGT GCTGATGGGC
TCGGCTTCTG GCCGTGAAGG CCTGGCCCAT GTGCACACGG TAATCGTCGA CGAAATCCAT
GCCTTGGCCG GTAACAAGCG TGGCGCCCAT CTGGCCCTGA CCTTGGAACG CCTGCAAGCC
TTGTGCAAAA AGCCACTGCG GCGTATCGGC CTGTCCGCTA CCCAACGCCC GGTCGAACGG
GTGGCACAGT TTCTGGTGGG TAGCGGGCGT CCCTGCGCCA TTGTCGATAT CGGCCATGCC
CGCAAGCGTG ACCTGGCCAT CGAAGTGCCG CCGGTACCGC TGGGGGCGGT GATGGCCATT
GATGTCTGGG GCCTGGTGTA TGACCGCTTG GCCACCCTTG CCCGTGAACA CCGCACCACG
CTGGTATTCG TCAACACCCG GCGCCTGGCC GAACGTATCA CCCGCCACCT CAGCGACCGG
CTGGGCAAGG AGGCGGTTGC CGCACACCAT GGCAGCCTGT CCAAAGCGCT GCGCCTGGAT
GCGGAGCAGC GGCTCAAGAG CGGCCAGCTC CAGGTGCTGG TAGCGACCGC ATCGCTGGAG
CTTGGCATTG ATATCGGCGA TATCGACCTG GTCTGCCAGG TCGCCTCGCC GGGCTCGATT
GCCGCCTTCC TGCAACGGGT TGGCCGCGCT GGACACCAGG TCGATGGTGT GCCGAAGGGG
CGCCTGTTCC CTACCTCACG CGATGACCTG ATCGAATGCG TTGCCTTGCT TGACTGCGTT
CGACAGGGCG AACTGGACGC ACTGCACATC CCCCGGGCAC CGCTGGATGT GCTGGCCCAG
CAGATCGTCG CAGAAGCCAG CAACCAGGCC TGGCACGAAC AGGAACTGCT GGATTGCCTG
CGCCAGGCCA CACCTTACGC CGAGCTTGAC CAGCACCACT ACCAGGCCCT GCTGCGCATG
CTCGCCGAGG GCTACAACGG CCGCCAGGGT GTGCGCAGTG CCTACTTGCA CCGTGACGCA
GTGAGCGGCA CGCTGCGTGG CCGACGTGGC AGCCAACTGA CCGCGCTGAC CAGCGGCGGC
ACCATCCCCG ACAACGCCGA CTACGCCGTG TTGCTGGAAC CGCAGGCGCT GAACATCGGC
AGCGTCAATG AAGACTTTGC CGTGGAAAGC ATTGCCGGCG ATATTTTCCA GCTGGGCAAC
GCCTCCTATC GCATTCTGCG CGTCGAGCCG GGCCGGGTGC GGGTAGAGGA TGCTCATGGC
CTGCCACCGA CCATTCCGTT CTGGCTGGGT GAAGCGCCGG GGCGCAGTGA CGAGCTGTCT
GCCGCCGTGG CCCGGCTGCA GGCGCGAATC GACCAGCAAC TGGCGCTGGC AGGCGGCGAC
ACGGTGGAGG TACTGGCCTG GTTGCAGGCG ACCTTCGAAC TGGACGAAGC TTGTGCGGGC
CAGTTGCTCG ACTACCTGGC CCGCACCCGT GAAGTGCTTG GCGCCCTGCC CTCGCAGGAT
ACGCTGGTGA TGGAACGTTT TTTCGATGAG TCCGGCGGGA CCCAACTGAT CATTCATTCA
CCCTACGGTA GCCGCATCAA CCGCGCCTGG GGCCTGGCCC TGCGCAAGCG CTTCTGCCGC
ACCTTCAACT TCGAACTGCA GGCTGCCGCC AGCGAGGACG CCATCGTGCT GTCACTGTCG
ACCAGCCACA GTTTCGAGCT GGACGAAGTG TGGCGCTACC TGAACAGCCG CAGCGCCGAG
CCGATTCTCA TCCAGGCCCT GCTCGATGCA CCGCTGTTTG GCGTGCGCTG GCGCTGGAAT
GCAGGCGTGG CCATGGCACT GCCGCGCTTT GTGGGCGGAC GCAAGGTGGC GCCACAAATC
CAGCGCATGA AGAGTGAGGA CCTGGTTGCC GCCGTGTTCC CTGACCAGAT CGCCTGCCTG
GAGAACATCG CCGGCGAGCG GCAGATTCCC GACCATCCGC TGGTCGAGCA AACCCTCGAC
GATTGCCTGC ACGAGGCGAT GGACAGCGAA GGCTGGCTGG CCCTGCTGCG GCGTATGGAA
AGCGGTGCAG TGCGCTTGCT GTGCCGGGAT CTGCCCGCCC CCTCGCCGCT GGCATCAGCG
ATTCTCAACG CCCGGCCTTA TGCCTTTCTG GACGATGCGC CACTGGAAGA ACGACGTACC
CAGGCGGTGC TCAACCGGCG CTGGAACGAC GTGCACAGTA GCGACGACCT GGGCGCGCTG
GACGCTGATG CCATTGCTGC CGTCGCGGCC GAGGCCTGGC CACAGCCGGC CAATCCCGAC
GAAATGCACG AGGCATTGAT GAGCCTGGGT GCCATCGGTC AGGTCGAGGT AGATGCCAAC
CCCTGCTGGG ATTTGCTGCT AAGGCAGCTG GCCAAGGCTG GGCGTGCCTT GCGCCTGCCC
GATGACAAGC TCTGGTTGGC CCGCGAACGC CTGAACCTGC TGCTGGCACT GTACCCCACA
GCGCACAGGG AGCCAGCGCT CGAACGGCTC GCTGGCTTCG ACCAGCCCAT CGAGCCCGAC
CACGCACTGA GCGAACTGCT GCGCGCCCGC CTGAGCGGCC ATGGCCCCCA GACCCTGGCG
CAGATCGCTG CGCCATTGGG CAAACCGGTA ACCGATATCG AGCAGGCTCT GGCCCGCCTG
GAAGCCGAAG GCTATGTGCT GCGCGGGCAT TTCAGCCCAG GTGCAACTGA CCTGCAATGG
TGCGAACGCC ACTTGCTGGC ACGCATCCAC CGCTACACGG TCAAACGCCT GCGCCGCGAG
ATCGAACCGG TCAGCCTGCA AGACTTCATG CGCTTTCTGT TCGATTGGCA GCACCTGGCG
CCTGACGAGC GCCTGCGTGG TCCGCAGGCG GTGGCCGAAG TGCTCGGCCA GTTACAAGGG
TTCCCCAGCG CCGCAGCGGC CTGGGAGGCG GAACTGCTGC CGGCGCGTAT CAAAGACTAC
AGTCCGCACT GGCTCGACGA AGCCTGCCGA AGCGGCCAGT TTGCCTGGAG CCGGCTGGCG
GCAACAGTGG CGAGCAGCAC GTTGACCAGT ACCCCGCTGG TGTTGCTGCC GCGGGACCAG
TTGAACACGT GGCGCAGCCT GGCGCCCGCA CCTGCTGTCG ACGCCCTTGG CCTACGTGCG
CAACGTGTGC ACGAAGCGCT GAAAACCCAG GGTGCGCTGT TCTTCGATGA ACTGGCACAT
GAGGCACACC TGCTGCCCAG TGAACTGGAA ACTGCACTGC AGGAGCTGGT GGGCTCGGGC
CTGGCCAGGG CGGACAGTTT CACTGGCTTG CGCAGCCTGA TCACGCCTGC AACCAAGCGC
AGCTCACGTA ACAGCCGCCG AGGCCACCCG CCGCTTTCCA GCAGCATGGC GCATGCCGGA
CGTTGGGCCC TGCTGCGCCG CAGCGATGCG CCCCCGGATC ACGACCAGCG CCTGGAGCAC
ATTGCCCGCA CGCTGCTGCG CCGCTATGGC GTGATCTGCT GGCGGCTGTT GGCGCGCGAG
AGTGATGTAC TGCCGCCCTG GCGTGAGCTG CTGCGCTGCT ATCACCGATT GGAAGCGCGT
GGCGAGATCC GGGGCGGGCG CTTCATTGCC GGGCTGGCCG GTGAACAGTT CGCCTTGCCT
GAGGCGGTAG TATTGCTGCG GCAAGTGAGA CGACGTGAAC CGGACGGAAC GCTGCAGGTG
GTGAGCGCCG GTGACCCGCT GAACCTGATC GGCTCGTTGC TGCCTGGGGC GAAAGTGCCG
GCAGTGATTG GCAACCGGCT TCTGTATCGC GACGGGATAC CGGTGGCGGT GCGGATGGCC
GGGCGTTACG CGTATCTGGT CGAGGCGTCC GCACAGGAGC AGGAAAGCTG GCGGCAAAAA
CTGCTGCGCG ACACCCTGGA GCGGGTTTAC CCGCGAATAC GGTAG
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| Protein sequence | MNLPAKHHPV LELFHPAVST WFRRHFATVT DAQAQAWPLI HAGQSMLLAA PTGSGKTLSA
FLAVLDELLR EGMKHQGELP AQTLVIYVSP LKALSNDIRL NLQAPLEGIS QAIAEQGLNA
PRITTAVRTG DTPQKERAAM RKLAPHILVT TPESLYVLMG SASGREGLAH VHTVIVDEIH
ALAGNKRGAH LALTLERLQA LCKKPLRRIG LSATQRPVER VAQFLVGSGR PCAIVDIGHA
RKRDLAIEVP PVPLGAVMAI DVWGLVYDRL ATLAREHRTT LVFVNTRRLA ERITRHLSDR
LGKEAVAAHH GSLSKALRLD AEQRLKSGQL QVLVATASLE LGIDIGDIDL VCQVASPGSI
AAFLQRVGRA GHQVDGVPKG RLFPTSRDDL IECVALLDCV RQGELDALHI PRAPLDVLAQ
QIVAEASNQA WHEQELLDCL RQATPYAELD QHHYQALLRM LAEGYNGRQG VRSAYLHRDA
VSGTLRGRRG SQLTALTSGG TIPDNADYAV LLEPQALNIG SVNEDFAVES IAGDIFQLGN
ASYRILRVEP GRVRVEDAHG LPPTIPFWLG EAPGRSDELS AAVARLQARI DQQLALAGGD
TVEVLAWLQA TFELDEACAG QLLDYLARTR EVLGALPSQD TLVMERFFDE SGGTQLIIHS
PYGSRINRAW GLALRKRFCR TFNFELQAAA SEDAIVLSLS TSHSFELDEV WRYLNSRSAE
PILIQALLDA PLFGVRWRWN AGVAMALPRF VGGRKVAPQI QRMKSEDLVA AVFPDQIACL
ENIAGERQIP DHPLVEQTLD DCLHEAMDSE GWLALLRRME SGAVRLLCRD LPAPSPLASA
ILNARPYAFL DDAPLEERRT QAVLNRRWND VHSSDDLGAL DADAIAAVAA EAWPQPANPD
EMHEALMSLG AIGQVEVDAN PCWDLLLRQL AKAGRALRLP DDKLWLARER LNLLLALYPT
AHREPALERL AGFDQPIEPD HALSELLRAR LSGHGPQTLA QIAAPLGKPV TDIEQALARL
EAEGYVLRGH FSPGATDLQW CERHLLARIH RYTVKRLRRE IEPVSLQDFM RFLFDWQHLA
PDERLRGPQA VAEVLGQLQG FPSAAAAWEA ELLPARIKDY SPHWLDEACR SGQFAWSRLA
ATVASSTLTS TPLVLLPRDQ LNTWRSLAPA PAVDALGLRA QRVHEALKTQ GALFFDELAH
EAHLLPSELE TALQELVGSG LARADSFTGL RSLITPATKR SSRNSRRGHP PLSSSMAHAG
RWALLRRSDA PPDHDQRLEH IARTLLRRYG VICWRLLARE SDVLPPWREL LRCYHRLEAR
GEIRGGRFIA GLAGEQFALP EAVVLLRQVR RREPDGTLQV VSAGDPLNLI GSLLPGAKVP
AVIGNRLLYR DGIPVAVRMA GRYAYLVEAS AQEQESWRQK LLRDTLERVY PRIR
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