Gene PP_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1040 
Symbol 
ID1044161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1189808 
End bp1190098 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content67% 
IMG OID637144435 
Producttwin-arginine translocation protein, TatB subunit 
Protein accessionNP_743201 
Protein GI26987776 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAGG TAGGCTTCAG CGAGTTGCTG CTGATCGGCG TCGTCGCGCT GTTGGTGCTG 
GGCCCCGAGC GCCTGCCGGT GGCAGCCCGT ACCCTCGGCC GCGGCCTGGG CCAGGCGCGC
CGGGCCATGC ACGCCTTGCG CACGCAGGTG GAGCGCGAAA TCGAGATGCC CAACCTCGAC
CAGGCACCTC TGCAACGCCT GGAACAGGAG ATCCGCCAGG GCATCAGCCT GAACGCGGAA
CCGGCCAATG ATGCGGCCAC GGCCGTGCTG CCCAAGGAAA ATGCTTCATG A
 
Protein sequence
MFEVGFSELL LIGVVALLVL GPERLPVAAR TLGRGLGQAR RAMHALRTQV EREIEMPNLD 
QAPLQRLEQE IRQGISLNAE PANDAATAVL PKENAS