| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1027 |
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| Symbol | xseA |
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| ID | 1044154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1171671 |
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| End bp | 1173050 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637144422 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | NP_743188 |
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| Protein GI | 26987763 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.444658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAG ACCCTTTCGA ACGACTCGGG CTGGACCGCG AGGTCCTTAC CGTCAGCCAA
CTCAACGGCC GCGCCCGCGT GCTGCTGGAA GACGTTTTCC GCAGCGTGTG GGTGGAAGGC
GAAATCTCCA ACCTCGCCCG CCCGGCGTCC GGCCACATGT ACTTCACCCT CAAGGACAGC
GGCGCCCAGG TGCGTTGTGC GTTGTTCCGG CAGAACGCCA CGCGGGTACG CCAGGCGCTG
CGCGACGGCC TGGCGGTGCG GGTGCGTGGC AAGGTTTCGC TGTTCGAGGG GCGTGGCGAC
TACCAGCTTA TTCTCGACAC CGTCGAGCCA GCCGGTGATG GCGCGCTGCG CCTGGCTTTC
GAGGCCCTGA AGGAAAAGCT CGGGGCCGAG GGGCTGTTCA GCGCCGAACG AAAGAAGCCA
CTGCCGGCTC ACCCGCAGCG CATCGGCATC ATCACCTCGC CCACTGGCGC GGTGATCCGC
GACATCATCA GCGTGTTCGG CCGCCGTGCC CCGCAGGTGG AGCTGAACCT GATACCTACG
GCGGTACAGG GCCGCGAAGC CATCGCGCAG ATCGTACGCG CCATCCGCCT GGCCGACAGC
CTCGGCTTCG ATGCGCTGAT CCTGGCGCGG GGTGGGGGTT CGCTGGAAGA CCTGTGGTGT
TTCAACGAGG AAGCCGTGGC GCGTGCCGTG GCCGCCTGCG TCACGCCGAT TGTCAGCGCC
GTGGGCCATG AAACCGACGT GTCGATCAGC GACTTCGTGG CTGACGTGCG CGCGCCCACC
CCGTCTGCGG CCGCCGAGCT GCTGGCCCCT GACAACAGCG GCCTTCGGCA ACGCCTGGAT
GGCCTGCAAC GGCGCCTGCT GCTGCGCATG CAGAACCGCC TGACCCACGA CCGCCTGCGC
CTGGAGTCAC TCACCCGGCG CCTGCGCCAC CCAGGCGAGC GTTTGCGCCA GCGGGCTCAA
CGCCTGGACG ACCTGGACAT GCGCCTGCGT CGCGCGTTCA TGCTCAACCT CAACCAGCGC
CGCGAACGCC TGGCACGCCT GGACGCCCGC CTGGCCGCGC AGCATCCGGG GCGTAACCTG
AAACTGCTGA ACCAGCGCCT GGACAGCCTG GCCGAGCGCC TGCCACGGGC CATGCGCGAG
GTGCTCAAGG ACCGTCGCCA GCGGTTCCAG GCCCAGTTGC AGACACTGCA GGTGGTCAGT
CCGCTGGCCA CTCTGGCCCG TGGATACAGC ATTTTGCTGG ATGAGCAAGG CCAGGCCATT
CGCAGCGCCG AACAGACCCG CAATGGCCAA CGCCTGACCG CCCGCCTGAA CGAAGGCGAG
TTGCTGGTGC GGGTCGAAGA CAACCACCTG ACCCCGGTCA CCCTCTCACT ACTGGACTGA
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| Protein sequence | MIKDPFERLG LDREVLTVSQ LNGRARVLLE DVFRSVWVEG EISNLARPAS GHMYFTLKDS
GAQVRCALFR QNATRVRQAL RDGLAVRVRG KVSLFEGRGD YQLILDTVEP AGDGALRLAF
EALKEKLGAE GLFSAERKKP LPAHPQRIGI ITSPTGAVIR DIISVFGRRA PQVELNLIPT
AVQGREAIAQ IVRAIRLADS LGFDALILAR GGGSLEDLWC FNEEAVARAV AACVTPIVSA
VGHETDVSIS DFVADVRAPT PSAAAELLAP DNSGLRQRLD GLQRRLLLRM QNRLTHDRLR
LESLTRRLRH PGERLRQRAQ RLDDLDMRLR RAFMLNLNQR RERLARLDAR LAAQHPGRNL
KLLNQRLDSL AERLPRAMRE VLKDRRQRFQ AQLQTLQVVS PLATLARGYS ILLDEQGQAI
RSAEQTRNGQ RLTARLNEGE LLVRVEDNHL TPVTLSLLD
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