Gene PP_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0972 
Symbol 
ID1044892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1111880 
End bp1112197 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content63% 
IMG OID637144367 
ProductGIY-YIG nuclease superfamily protein 
Protein accessionNP_743133 
Protein GI26987708 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGC CCTGGTTTGT CTATCTGGTA AGGGCTGCCA ATGGCTCGTT GTATTGCGGC 
ATCAGCGATG ACCCGCAGCG TCGGTTCGCC GCGCATCAGA AAGGGCAGGG CGCCCGCTAT
TTCAAGACCA GCCCGGCCCA GGCGCTGGTG TATGTGGAGC AGTGGCCGGA CAAGAGCGCG
GCGCTGCGCC AGGAGCGGTT GGTGAAACGG CTGCGCAAGT CGGCGAAGGA GGCACTGGTG
GCCTCCTTTG GCGGCTTGGG GGAAATCAGT CCTTGCGGCG CTTCAGCTGA TCCACCAAGG
TTGTCGGCAG CCCCTTGA
 
Protein sequence
MGKPWFVYLV RAANGSLYCG ISDDPQRRFA AHQKGQGARY FKTSPAQALV YVEQWPDKSA 
ALRQERLVKR LRKSAKEALV ASFGGLGEIS PCGASADPPR LSAAP