Gene PP_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0934 
SymbolmreC 
ID1044842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1076620 
End bp1077618 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content66% 
IMG OID637144329 
Productrod shape-determining protein MreC 
Protein accessionNP_743095 
Protein GI26987670 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGATGT CGGTCGCGTT GATGGTTGTC GACGCGCGCT TCGACGTGCT CAAACCCGTG 
CGCAGCCAGA TGGGCCTGGT GCTGATGGAG TCGTACTGGA TCACCGATTT GCCACAGCGT
GCCTGGCAAG GTGTGGCCGG CCAGTTCGGT AGCCGCACCG AGCTGATTGC CGAAAACGAG
AAGCTCAAGA CCGAAGCCCT GCTGCTGCAG GGGCGCCTGC AGAAGCTGGC GGCCCTGACC
GAGCAGAACG TGCGGCTGCG CGAGTTGCTC AACTCTTCGG CGCTGGTCAA CGAAAAGGTT
GAAGTGGCCG AGCTGATCGG TGTCGACCCC AACCCGTTTA CCCACCGCAT TCTGATCAAC
AAGGGTGAGC GTGATGGTGT GTTCCTGGGC CAGCCGGTGC TCGATGCCCG CGGCCTGATG
GGCCAGGTCG TAGAGTTGAT GCCCTATACC GCGCGGGTGC TGTTGCTGAC CGATACCACC
CACAGCATTC CGGTGCAGGT CAACCGCAAC GGTCTGCGTG CCATCGCCAG CGGCACTGGC
AACCCGGAGC GCCTGGAGTT GCGGCATGTG GCCGACACTG CCGACATCAA GGAAGGCGAC
CTGCTGGTCA GTTCCGGCAT GGGGCAGCGC TTTCCTGCCG GCTACCCGGT GGCCACGGTC
AACGAAGTGA TCCACGATTC CGGCCAACCC TTTGCCATCG TCCGTGCCAT CCCCACCGCC
GCGCTCAACC GCAGCCGCTA TATGTTGCTG GTGTTCAGTG ACCGGCGTAG CCCGGAGCAG
CGCGCCACCG ATGCCGCCAT TGCCCAGGAA GAGGCTGACC GCAAGGGCGC TGCACCTGCT
GGCCAGCCGG CCGCTACCCG TGATCAGGTC GCACCCGCCG CTGGCACGCC TGCCGCGTCG
GTCACACCGG CAGCACCGGC CACTCCGGTC GCGCAGCCAG CAGCCCCGTC TGCTGCACCT
GCCACGCCGG CCGCACCCGC TCAACCCCGG AGGCAATGA
 
Protein sequence
MVMSVALMVV DARFDVLKPV RSQMGLVLME SYWITDLPQR AWQGVAGQFG SRTELIAENE 
KLKTEALLLQ GRLQKLAALT EQNVRLRELL NSSALVNEKV EVAELIGVDP NPFTHRILIN
KGERDGVFLG QPVLDARGLM GQVVELMPYT ARVLLLTDTT HSIPVQVNRN GLRAIASGTG
NPERLELRHV ADTADIKEGD LLVSSGMGQR FPAGYPVATV NEVIHDSGQP FAIVRAIPTA
ALNRSRYMLL VFSDRRSPEQ RATDAAIAQE EADRKGAAPA GQPAATRDQV APAAGTPAAS
VTPAAPATPV AQPAAPSAAP ATPAAPAQPR RQ