Gene PP_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0929 
Symbol 
ID1044832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1071444 
End bp1071818 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content65% 
IMG OID637144324 
Productrare lipoprotein A 
Protein accessionNP_743090 
Protein GI26987665 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.352567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTAAAAC GTTCCCTCGG CACCCTCGCC CTGTTTTCTT TCCTGGCCGG CTGCGCCAGC 
CATGACATCG ACCCGCGCGG CTACGACCAG ACGGGCACCG CTTCCTACTA CGGCTCGCGC
CACCATGGCA AACGCACCGC CAGTGGCGAA CCGTTCAACC AGCACGCCCT TACCGCCGCC
CACCGCAGCC TGCCCTTCGG CACACGTGTG CGGGTGACCA ACATGGCCAA CCAGCGCAGT
GTGGTGGTAC GCATAAACGA CCGTGGCCCG CACACCCGCG GCCGCCTGAT CGACCTGTCT
CGCGCAGCAG CGGAAAAAAT CGGCATGCTC CGTAGCGGAA CAGCCCGCGT GCGAGTACAA
GGGCTTAGCG ACTGA
 
Protein sequence
MLKRSLGTLA LFSFLAGCAS HDIDPRGYDQ TGTASYYGSR HHGKRTASGE PFNQHALTAA 
HRSLPFGTRV RVTNMANQRS VVVRINDRGP HTRGRLIDLS RAAAEKIGML RSGTARVRVQ
GLSD