Gene PP_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0924 
Symbol 
ID1044826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1065842 
End bp1066597 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content64% 
IMG OID637144319 
Producthypothetical protein 
Protein accessionNP_743085 
Protein GI26987660 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGGA TCGCTACCGC TGGCGACTAC AGCACCGAAC GCCGTCTGCA AGCCGAACGC 
CTGGTTGGCG CCGCGGCGTT GCAAGAAGCC CAGGCTCTGC GCTACACCGT ATTCAGCGCA
GAATTCAAGG CCAAGCTCAA AGGTGCCGAG CAGGGCCTGG ACATGGACGA CTACGACGTG
CACTGCCGCC ACATTGGTGT ACGCGACCTG AGCACCGGCG AACTGGTTGC CACCACCCGC
CTGCTCGATC ACCAGGCCGC CAGCAGCCTG GGCCGTTTCT ACAGCGAAGA AGAATTCAGC
CTGCACGGCC TGTTGCAGCT GCAAGGCCCG ATCCTCGAAC TGGGCCGTAC CTGCGTCGCC
CCCGACTACC GCAACGGCGG TACCATCGCC GTGCTTTGGG GCGAACTGGC CGAGGTGCTC
AACGAGGGCC GCTACAGCTA TCTGATGGGC TGCGCCAGTA TCCCCATGCA GGACGGCGGC
GTTCAGGCCC ATGCAGTGAT GCAGCGCCTG CGTGAACGTT ACCTGTGCAC CGAACACCTG
CGTGCCGAGC CGAAGAACCC GCTGCCGAAA CTGGCCCTGC CCAATAACGT CATTGCCGAA
ATGCCCCCGC TGCTCAAGGC CTATATGCGC CTGGGCGCGA AGATTTGCGG CGAGCCATGC
TGGGACGAGG ATTTCCAGGT GGCAGACGTG TTCATCCTGC TCAAACGCGA CGAGCTGTGC
CCACGCTACG CCCGCCACTT CAAGGCGGCG GTCTGA
 
Protein sequence
MTRIATAGDY STERRLQAER LVGAAALQEA QALRYTVFSA EFKAKLKGAE QGLDMDDYDV 
HCRHIGVRDL STGELVATTR LLDHQAASSL GRFYSEEEFS LHGLLQLQGP ILELGRTCVA
PDYRNGGTIA VLWGELAEVL NEGRYSYLMG CASIPMQDGG VQAHAVMQRL RERYLCTEHL
RAEPKNPLPK LALPNNVIAE MPPLLKAYMR LGAKICGEPC WDEDFQVADV FILLKRDELC
PRYARHFKAA V