| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0906 |
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| Symbol | |
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| ID | 1044798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1045331 |
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| End bp | 1048375 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637144301 |
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| Product | multidrug efflux protein |
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| Protein accession | NP_743067 |
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| Protein GI | 26987642 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.216177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTCA CCGACACGTT CATCCAACGC CCGGTGCTGG CCAGCGTGGT CAGCCTGCTG
ATTCTGCTGC TCGGCTTCCA GGCCTGGAAC AAGCTGCAGA TCCGCCAGTA CCCGCAAATG
GAAAACGCCC TGATCACGGT CACCACCGCC TACCCCGGGG CCAACGCCGA AACCATTCAG
GGCTATATCA CCCAGCCATT GCAGCAAAGC CTGGCCAGCG CCGAAGGCAT CGACTACATG
ACCTCGGTGA GCCGGCAGAA TTTCTCGATC ATTTCCATTT ACGCGCGCAT TGGCGCCGAC
AGCGACCGGC TGTTCACCGA GCTGCTGGCC AAGGCCAATG AGGTGCGAAA CAAGCTACCC
CAGGACTCCG AAGACCCGGT ACTGAGCAAG GAAGCTGCCG ACGCCTCGGC GCTGATGTAC
GTCAGCTTCT ACAGCAAGGA AATGAGCAAC CCGCAGATCA CCGACTACCT GTCACGGGTT
ATCCAGCCCA AGCTGGCCAC TCTGCCGGGC ATGGCCGAGG CGGAGATCCT CGGCAACCAG
GTGTTCGCCA TGCGCCTGTG GCTGGACCCG GTGAAGCTGG CCGGTTTCGG CCTTTCGGCT
ACCGACGTGA CCAATGCCGT ACGCCGCTAC AACTTCCTTT CCGCCGCTGG CGAGGTGAAA
GGCGAATACG TGGTCACCAG CGTCAACGCC AGCACCGAGC TGAAGTCGGC CGAGGCGTTC
GCCGCCCTGC CGCTCAAGAC CAGCGGTGAC AGCCGCGTGC TGCTGGGCGA TGTGGCGCGG
GTCGAGATGG GCGCAGAAAA CTACGACACG GTCAGCTCGT TCGACGGCAC CCCGTCGGTC
TATATCGGCA TCAAGGCCAC CCCGGCCGCC AACCCGCTGG ATGTCATCAA GGAAGTGCGG
CGCATCATGC CTGAGCTGGA AAGCCAGCTG CCCTCGGCAC TGAACGTATC GATTGCCTAC
GACGCCACGC GGTTCATCCA GGCCTCGATC GACGAAGTGA TCAAGACCTT GGGCGAAGCG
GTTCTGATCG TCATCGTCGT GGTGTTCCTG TTCCTCGGTG CCCTGCGCTC GGTACTGATT
CCGGTGGTGA CCATACCGCT GTCGATGATC GGTGTACTGT TCTTCATGCA GATGATGGGC
TACTCGCTCA ACCTGCTGAC CCTGCTCGCC ATGGTGCTGG CCATCGGCCT GGTGGTGGAC
GATGCCATTG TGGTGGTGGA GAACATTCAC CGGCACATGG AAGAAGGCAA GTCGCCGTTC
GATGCAGCCC TGGAAGGCGC GCGCGAAATT GCCATGCCAG TGGTGTCCAT GACCATCACC
CTTGCCGCCG TGTATGCACC GATCGGCTTC CTCACCGGGC TCACCGGCGC GCTGTTCAAG
GAGTTTGCCC TGACGCTGGC CGGGGCGGTG ATCATTTCCG GAATCGTTGC CCTGACCCTG
TCACCGATGA TGTGCGCCCT GCTGCTGCGC CGGGAGCAGA ACCCGAGCGG CCTGGCCCAC
CGCCTCGATC AGCTGTTCGA ACGCCTGAAA GGGCGCTACC AGCGTTTGCT GCACGCCACC
CTCGACAGCC GGCCGGTGGT GCTGGTGTTT GCCGTGATCA TCCTGTGCCT GATCCCGGTG
CTGCTCAAAT TCACCCAGAA CGAACTGGCG CCCAACGAGG ACCAGGGGGT GATCTTCATG
ATGAGCAGCT CGCCTCAACC GGCCAACCTC GACTACCTCA ACGCCTACAC CGACCAGTTC
ACACCGCTGT TCAAGGCCTT CCCCGAGTAT TACTCGTCGT TTCAGATCAA CGGCTTCAAC
GGCGTGCAGA CCGGTATCGG TGGTTTTTTG CTCAAGCCCT GGAACGAGCG CGAACGCACG
CAGATGGAGC TACTGCCGCT GGTGCAGGCC AAACTCGAGG AAATCAGCGG GCTGCAGATC
TTCGGCTTCA ACCTGCCTTC GTTACCCGGC ACTGGCGAGG GCTTGCCATT CCAGTTCGTG
ATCAATACCG CTGGCGACTA CCCGGCACTG CTGGACGTGG CCCAACGCAT CAAGACGCGC
GCTCAGGAAT CGGGCAAGTT CGCCTTCCTC GATATCGATC TTGCCTTCGA CAAACCCGAA
GTGGTGGTGG ACATCGACCG GGCAAAGGCG GCGCAGATGG GGGTGTCGAT GGACACCCTC
GGCGGCACCT TGGCGACCCT GCTGGGCGAG GCGGAAATCA ACCGTTTCAC CCTTGAAGGC
CGCAGTTACA AGGTGATCGC CCAGGTTGAA CGGCCTTACC GCGACAACCC CGGCTGGCTG
AACAACTACT ACGTGAAGAA CGACCAGGGC CAGTTGCTAC CGCTGTCGAC CCTGATCACC
CTCACCGACC GCGCTCGCCC ACGCCAGCTC AACCAGTTCC AGCAACTGAA CGCTGCGATC
ATTCAGGGCG TGCCCATGGT CAGCCTGGGC GAGGCGCTCA AGACCGTGCA GGACATCGCT
CGCGAAGAGG CCCCGGAAGG CTTTGCCTTC GACTACGCCG GCGCGGCCCG CCAGTATGTA
CAGGAAGGCA GCGCATTGTG GGTCACCTTC GGCCTGGCGC TGGCGATCAT TTTCCTCGTA
CTGGCTGCAC AGTTCGAAAG CTTCCGCGAC CCGTTGGTGA TTCTGGTGAC AGTGCCGTTG
TCCATCTGTG GCGCGCTTTT GCCGCTGTTC CTGGGTGTGT CGAGCATGAA CATCTACACC
CAGGTCGGGC TGGTGACATT GATCGGGCTT ATCAGCAAGC ACGGTATCCT GATCGTCGAG
TTCGCCAATC AGCTACGCGA TGAGCGTGGC CTGAGTGTGC GCGAAGCGAT CGAGGAAGCA
GCGGCCATTC GCCTGCGGCC GGTGCTGATG ACCACTGCGG CTATGGTGTT CGGCATGGTG
CCGCTGATTC TGGCAAGCGG GGCAGGAGCG GTCAGCCGGT TTGACATCGG TATGGTGATT
GCCACCGGGA TGTCGATTGG CACGTTGTTT ACCTTGTTTG TGTTGCCGTG CATCTACACC
CTGCTGGCGC ACAAGGCGAG CGCCAAGGCA CCTGCAATCG CTTGA
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| Protein sequence | MAFTDTFIQR PVLASVVSLL ILLLGFQAWN KLQIRQYPQM ENALITVTTA YPGANAETIQ
GYITQPLQQS LASAEGIDYM TSVSRQNFSI ISIYARIGAD SDRLFTELLA KANEVRNKLP
QDSEDPVLSK EAADASALMY VSFYSKEMSN PQITDYLSRV IQPKLATLPG MAEAEILGNQ
VFAMRLWLDP VKLAGFGLSA TDVTNAVRRY NFLSAAGEVK GEYVVTSVNA STELKSAEAF
AALPLKTSGD SRVLLGDVAR VEMGAENYDT VSSFDGTPSV YIGIKATPAA NPLDVIKEVR
RIMPELESQL PSALNVSIAY DATRFIQASI DEVIKTLGEA VLIVIVVVFL FLGALRSVLI
PVVTIPLSMI GVLFFMQMMG YSLNLLTLLA MVLAIGLVVD DAIVVVENIH RHMEEGKSPF
DAALEGAREI AMPVVSMTIT LAAVYAPIGF LTGLTGALFK EFALTLAGAV IISGIVALTL
SPMMCALLLR REQNPSGLAH RLDQLFERLK GRYQRLLHAT LDSRPVVLVF AVIILCLIPV
LLKFTQNELA PNEDQGVIFM MSSSPQPANL DYLNAYTDQF TPLFKAFPEY YSSFQINGFN
GVQTGIGGFL LKPWNERERT QMELLPLVQA KLEEISGLQI FGFNLPSLPG TGEGLPFQFV
INTAGDYPAL LDVAQRIKTR AQESGKFAFL DIDLAFDKPE VVVDIDRAKA AQMGVSMDTL
GGTLATLLGE AEINRFTLEG RSYKVIAQVE RPYRDNPGWL NNYYVKNDQG QLLPLSTLIT
LTDRARPRQL NQFQQLNAAI IQGVPMVSLG EALKTVQDIA REEAPEGFAF DYAGAARQYV
QEGSALWVTF GLALAIIFLV LAAQFESFRD PLVILVTVPL SICGALLPLF LGVSSMNIYT
QVGLVTLIGL ISKHGILIVE FANQLRDERG LSVREAIEEA AAIRLRPVLM TTAAMVFGMV
PLILASGAGA VSRFDIGMVI ATGMSIGTLF TLFVLPCIYT LLAHKASAKA PAIA
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