Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0888 |
Symbol | |
ID | 1044774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1031293 |
End bp | 1031853 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144283 |
Product | two component transcriptional regulator, Fis family |
Protein accession | NP_743049 |
Protein GI | 26987624 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.414248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG AAAACCAGGT CGAAAGCGAA GAGCTGCCGC ACCTGCTGCT GGTGGATGAC GATGCCACCT TCACCCGGGT CATGGCCCGG GCCATGAGCC GTCGCGGTTT CCGTGTGAGC ACTGCCAGTT CTGCCGAAGA AGGCTTGATT CTGGCCCAGC AGGACCTGCC GGACTACGCC ACGCTGGACC TGAAGATGGA TGGCGACTCC GGCCTGGTGC TGCTGCCCAA GCTGCTGGAA CTGGACCCGG AAATGCGCGT GGTGATCCTG ACCGGGTACT CGAGCATTGC CACCGCAGTG GAGGCGGTCA AGCGCGGTGC CTGCAACTAC CTGTGCAAGC CGGCTGACGC CGATGACGTG TTGGCAGCAC TGCTGTCGGA GCACACCGAC CTGGATACCC TGGTGCCGGA AAACCCGATG TCGGTCGATC GCCTGCAGTG GGAACACATC CAGCGCGTGC TGAACGAGCA TGAAGGCAAT ATCTCGGCCA CCGCACGGGC GCTGGGCATG CACCGACGGA CGTTGCAGCG CAAGCTGCAG AAGCGGCCGG TTCGGCGCTG A
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Protein sequence | MSEENQVESE ELPHLLLVDD DATFTRVMAR AMSRRGFRVS TASSAEEGLI LAQQDLPDYA TLDLKMDGDS GLVLLPKLLE LDPEMRVVIL TGYSSIATAV EAVKRGACNY LCKPADADDV LAALLSEHTD LDTLVPENPM SVDRLQWEHI QRVLNEHEGN ISATARALGM HRRTLQRKLQ KRPVRR
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