| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0884 |
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| Symbol | |
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| ID | 1044769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1025373 |
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| End bp | 1026965 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144279 |
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| Product | dipeptide ABC transporter, periplasmic peptide-binding protein |
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| Protein accession | NP_743045 |
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| Protein GI | 26987620 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0511525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCACG TTACCTGCCT TTCCGCGCTG CTGGCCCTGG GCCTGGTCAG CCAATCCCCG
GTCCTGCTCG CCAACAACCT AGTGTTCTGC TCTGAAGGTA GCCCCGCCGG TTTCGACACC
GCCCAGTACA CCAGCGCCAC CGACAACGAC GCCGCCGAAC CCATCTACAA CCGCCTGGTC
GAGTTCGAAC GTGGCGGCAC CGCCGTGCAT CCGGCCCTGG CGACGCACTG GGAGGTGTCC
GACAACGGCC TGCGCTACAC CTTCCACCTG CGTGAAGGGG TCAGGTTCCA CAGCAACAAG
GCCTTCAGCC CGAGCCGCAC GTTCAACGCC GACGATGTGC TGTTCACCTT CAACCGCATG
CTCGACAAGG GTCATCGGTT CCGTCAGGCC TACCCTACCG AGTTTCCCTA TTTCAACGGC
ATGGGCCTGG ACAAGAACAT CGCCCGTGTC GAGAAGACCG ACCCATTGAC CGTGGTGTTC
ACCCTGAACA CCGTCGATGC CGCGTTCATC CAGAACCTGG CCATGAGCTT CGCCTCCATC
CTCTCCGCTG AATACGCCGA GCAGCTACTG GCCAGTGGAC GCCCCAGCGA CATCAATCAG
CAGCCTATCG GTACCGGGCC GTTCGTGTTC CAGCGCTACC AGAAGGATTC GCAGATCCGC
TACAAGGGCA ACAAGGACTA TTGGGCAGCG AACGAGGTGA AGATCGACAA CCTGGTGTTC
TCGATCAATA CCGACCCGTC GGTGCGTATC CAGAAGCTGC GCCGCAATGA ATGCCAGGTG
ACCCTGCACC CACGCCCGGC CGACCTGCCG GCGCTCAAGG CCGACAGCAC GCTGCAGGTG
CTCCAGCAAC CAGGCTTCAA CCTCGGCTAC ATCGCCTACA ACACCCAGCA CCCGCCATTC
GACCGCCTGG AAGTGCGCCA GGCAATGGAC ATGGCGGTCA ACAAGGAAGC CATCCTCCAG
GCGGTGTACC AGGACGCCGG CCAACGGGCG GTCAACGCCA TGCCACCGAC CCAGTGGTCC
TATGACGACA GCATCAAGGA CGCCCCGTAC GCGCCGGAAA AGGCCAGACA GCTGATCCAG
CAGGCGGGTG TCAAACCTGG CACCGAGATC ACCCTGTGGG CCATGCCGGT GCAACGCCCG
TACAACCCCA ATGCCAAGCT GATGGCCGAA ATGCTCCAGG CGGACTGGAG CAAGCTCGGA
TTCAAGGTGC GCATCGTCAG CTACGAATGG GGCGAATACC TCAAGCGCAT GAAAAACGGT
GAGCACGACA TCGCCCTGAT CGGCTGGACC GGTGACAACG GCGACCCGGA CAACTGGCTG
GGTACCCTCT ACAGCTGCGA TGCCATCGGC AGCAACAACT ACTCGCAGTG GTGCGATCCG
CAGTACGACA GCCTGGTCAA GCAGGCCAAG CAAGTGACCG ACCGTACGCA ACGCACCGCC
CTGTACCAGC AGGCCCAGCA GCGGCTCAAG CAGCAGGTAC CGATTACGCC GGTGGCGCAT
TCCATCGTGA GCCAGCCGCT TAGCGTCAAG GTTTCCCAGT TCAAGGTCAG CCCGTTTGGG
CGCAATGATT TTTCCGGTGT GAGTGTTGAT TAA
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| Protein sequence | MRHVTCLSAL LALGLVSQSP VLLANNLVFC SEGSPAGFDT AQYTSATDND AAEPIYNRLV
EFERGGTAVH PALATHWEVS DNGLRYTFHL REGVRFHSNK AFSPSRTFNA DDVLFTFNRM
LDKGHRFRQA YPTEFPYFNG MGLDKNIARV EKTDPLTVVF TLNTVDAAFI QNLAMSFASI
LSAEYAEQLL ASGRPSDINQ QPIGTGPFVF QRYQKDSQIR YKGNKDYWAA NEVKIDNLVF
SINTDPSVRI QKLRRNECQV TLHPRPADLP ALKADSTLQV LQQPGFNLGY IAYNTQHPPF
DRLEVRQAMD MAVNKEAILQ AVYQDAGQRA VNAMPPTQWS YDDSIKDAPY APEKARQLIQ
QAGVKPGTEI TLWAMPVQRP YNPNAKLMAE MLQADWSKLG FKVRIVSYEW GEYLKRMKNG
EHDIALIGWT GDNGDPDNWL GTLYSCDAIG SNNYSQWCDP QYDSLVKQAK QVTDRTQRTA
LYQQAQQRLK QQVPITPVAH SIVSQPLSVK VSQFKVSPFG RNDFSGVSVD
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