Gene PP_0841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0841 
Symbol 
ID1044703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp978012 
End bp978503 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content63% 
IMG OID637144236 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionNP_743002 
Protein GI26987577 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTGA CTACCAAAGG CCGATACGCC GTGACCGCCA TGCTCGACCT GGCGTTGCAC 
GCGAAGCATG GGCCGGTGTC TTTGGCCGAT ATTTCCGAGC GCCAGGGCAT TTCCCTCTCT
TATCTGGAGC AGCTGTTCGC CAAGCTGCGC CGCAGCAGCC TGGTTTCCAG TGTGCGCGGT
CCAGGCGGTG GCTACCAGCT GTCGCGGGGC ATGGAAACCA TCCAGGTGGC CCAGGTTATC
GACGCGGTCA ACGAATCGGT CGACGCCACC CGCTGCCAGG GGCTCGGTGA CTGCCATGCC
GGTGATACCT GCCTGACCCA CCACCTGTGG TGCGACCTCA GCCAGCAGAT CCATGAATTC
CTCAGCGGCA TAAGCCTGGC CGACCTCGTC AAGCGCCGTG ATGTGCAGGA AGTCGCCCAG
CGCCAGGACC TGCGCCGTGT CGCAGGACGA ACCGCCCAGC TGGACAAGAT TGAGACGTCT
GCCGTCGATT GA
 
Protein sequence
MRLTTKGRYA VTAMLDLALH AKHGPVSLAD ISERQGISLS YLEQLFAKLR RSSLVSSVRG 
PGGGYQLSRG METIQVAQVI DAVNESVDAT RCQGLGDCHA GDTCLTHHLW CDLSQQIHEF
LSGISLADLV KRRDVQEVAQ RQDLRRVAGR TAQLDKIETS AVD