Gene PP_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0813 
SymbolcyoB 
ID1044662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp951168 
End bp953186 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content59% 
IMG OID637144207 
Productcytochrome o ubiquinol oxidase, subunit I 
Protein accessionNP_742974 
Protein GI26987549 
COG category[C] Energy production and conversion 
COG ID[COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 
TIGRFAM ID[TIGR02843] cytochrome o ubiquinol oxidase, subunit I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0189476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.73245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGTA AATTAAGCCT GGAGGCGATA CCCTATCACG AGCCGATAGT CATGGTGACG 
CTTGCCATGA TCGCGCTCGG CGGTATCGCT GTCGTCGGTC TTATCACCTA TTTCCGCAAG
TGGACCTACT TGTGGAGCGA GTGGCTGACT ACTGTCGACC ACAAAAAGAT CGGCGTGATG
TACATCATCG TCGCGATGGT CATGCTGCTG CGCGGCTTTG CCGACGCCAT CATGATGCGT
ACCCAGCTGG CTGCCGCAAC CGGCGGCTCC GAAGGCTACC TGCCGCCTGA ACACTATGAC
CAGATCTTCA CCGCTCACGG TGTGATCATG ATCATCTTCA TGGCGATGCC GTTCTTCACC
GGCCTGATGA ACCTGGCGGT TCCTCTGCAG ATCGGTGCAC GTGACGTTGC CTTCCCGTTC
CTGAACTCCC TGAGCTTCTA CCTGCTGCTG GCAGGCGTGC TGTTGGTCAA CATCTCGCTG
GGCGTTGGTG AATTCGCCAA GACCGGCTGG GTTGCCTATC CGCCGCTCGC GGGCATTCAG
TACAGCCCTG GGGTGGGTGT CGACTACTAC ATCTGGGCGC TACAGCTATC CGGATTGGGT
ACGACGCTTA CTGGCGTGAA CTTCCTCGTC ACCGTGATGA AGATGCGCGC ACCTGGCATG
AAACTGATGG ACATGCCGAT CTTCACCTGG ACCTGCACCT GGGCCAACGT GTTGATCGTC
GCTTCGTTCC CGATCCTGAC TGCTGCACTC GCTCTGCTGA CTGTTGACCG TTATCTGGAC
TTCCACATCT TCACCAACGA GCTTGGTGGG AACCCGATGA TGTACGTCAA CCTGTTCTGG
GCGTGGGGTC ACCCTGAGGT TTACATCCTG ATCCTGCCGG CCTTCGGCGT GTTCTCGGAA
GTAACTTCGA CGTTCTCTGG CAAACGCCTG TTCGGCCACC ACTCGATGAT TTACGCATCG
GGCGCGATCG CCATCCTCGG CTTTGCTGTA TGGCTGCACC ACTTCTTCAC CATGGGTGCC
GGCGCCAGCG TCAACACCTT CTTCGGCCTG GCGACGATGC TGATCTCCAT TCCGACCGGT
GTGAAGCTGT TCAACTGGCT GTTCACCATG TACCAAGGCC GTGTGCGCTT CACCGCACCG
ATGCTCTGGA CCCTGGGCTT CATGGTCACT TTCTCCATCG GTGGCATGAC CGGCGTACTG
CTGGCCGTTC CGGGTGCTGA CTTCGTCCTG CACAACAGCC TGTTCGTAAT TGCGCACTTC
CACAACGTGA TCATCGGTGG CGCGGTATTC GGCTACATCG CCGGTTTCGC CTTCTGGTTC
CCGAAAGCCT TCGGCTTCAC CCTGAACGAG AAGTGGGGCA AAGCTGCCTT CTGGTTCTGG
CTGTCGGGCT TCTACGTTGC GTTCATGCCG CTGTACGCCC TGGGCTTCAT GGGCATGACC
CGTCGTCTGA ACCACTCCGA CAACCCACTG TGGGAACCCT ACCTGTACGT AGCCGTTGTC
GGCGCCGTGC TGATCCTGTT CGGTATCGCT TGCCAGCTGA TCCAGATCGT CGTTTCGGTC
CGCGACCGCA ACCAGAACCT GGACGTGACC GGCGACCCAT GGGGCGGCCG TACCCTGGAA
TGGTCGACTT CTTCGCCACC TCCGTTCTAC AACTTCGCTC ACATGCCTGA GAAAGTTGGC
CTGGACTGCT GGCACGAAGC CAAGGAAGCA GGCGTTGCGT ACAAGGCTCC GGCCAAGTAC
GAAGCCATTC ACATGCCGAG CAACACCGCT ACCGGTCTGT TCATGGGCCT GTTCCTGACT
GTCTTCGGCT TCGCCTTCAT CTGGCACATC TGGTGGCTGG TTGGCGCGAG CCTGGTTGCA
ACCATCGCTG TCTTCGTTCG CCACGCTGCA CGTGACGACC AGGGCTACAT GGTTCCGGCC
GAAGAAGTGG CGCGCATCGA AGGCGAGCGT ATGAAAGCGC TGGCCAAAGC AGGTGCTCTG
CCTGCCGGCG CACGTGTCGA ATCGTTTGAG CGGGTGTAA
 
Protein sequence
MFGKLSLEAI PYHEPIVMVT LAMIALGGIA VVGLITYFRK WTYLWSEWLT TVDHKKIGVM 
YIIVAMVMLL RGFADAIMMR TQLAAATGGS EGYLPPEHYD QIFTAHGVIM IIFMAMPFFT
GLMNLAVPLQ IGARDVAFPF LNSLSFYLLL AGVLLVNISL GVGEFAKTGW VAYPPLAGIQ
YSPGVGVDYY IWALQLSGLG TTLTGVNFLV TVMKMRAPGM KLMDMPIFTW TCTWANVLIV
ASFPILTAAL ALLTVDRYLD FHIFTNELGG NPMMYVNLFW AWGHPEVYIL ILPAFGVFSE
VTSTFSGKRL FGHHSMIYAS GAIAILGFAV WLHHFFTMGA GASVNTFFGL ATMLISIPTG
VKLFNWLFTM YQGRVRFTAP MLWTLGFMVT FSIGGMTGVL LAVPGADFVL HNSLFVIAHF
HNVIIGGAVF GYIAGFAFWF PKAFGFTLNE KWGKAAFWFW LSGFYVAFMP LYALGFMGMT
RRLNHSDNPL WEPYLYVAVV GAVLILFGIA CQLIQIVVSV RDRNQNLDVT GDPWGGRTLE
WSTSSPPPFY NFAHMPEKVG LDCWHEAKEA GVAYKAPAKY EAIHMPSNTA TGLFMGLFLT
VFGFAFIWHI WWLVGASLVA TIAVFVRHAA RDDQGYMVPA EEVARIEGER MKALAKAGAL
PAGARVESFE RV