Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0728 |
Symbol | |
ID | 1044561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 844837 |
End bp | 846006 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637144122 |
Product | hypothetical protein |
Protein accession | NP_742889 |
Protein GI | 26987464 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.936074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAACGAGC TACGCCAGTT GACCGAGCAC ATTATTTCCC CCAGCGGCCC GTTCTTCTCC GACCTGACAC GTCTACCGAG TATTACTGAC AAGGTGCAGA GTTTAATGGC GAGGCAACCT CGGGGCGAGT CCTTGCAACG TATGAGGAAT GCTCTATCGG CGGCCAACGT GGTCGCTGAA GTATTCGCTG GCGCTGCCCG TGCAGCGTTC GTAGGTACCG CAATAATTAA ATCGCTGGAA ACAGCGGGGG TAGTATCTGC CGGTTTCATC GATCATGTGA CCGGAGGGGT CAATAGTATC GGTCGCGAGA TGGCCAGCGA TTTCCAGACG TTGCATAAGG ACGATTTCCT AAAGCTCCAC GGTCATGTCC GGCCAGGTAC CTACGATATA CGTGTGGCGC GCTACGACGA GACTCCGGAG AGTTATTTTG ACTGGCAGCG CCCATTACAA CGCCCCCCAA AATCTACGAA CGGGCTAACT GTATCTCGGG CCCAGGTCAA CGCCATGCAG CAAGCTTTCG ACCAGTGCGG TCTTAACGTT TCCGCCGAGC AGTTCCTCCA ATTTGCTCAA GCCGCTATTG CATCGCGCGA GAAGCTCAAA TACCTCTATG CAGCGTTTGT TTCGGATGTT TTGCGCTCAC TATGCGATTG GGGTGAGGTA CATGGTCTTG ACCGCGACCA ACTCAGCTTT GCGCAAATCA CCGACTTTAC CCGCGGTTAC GCCGACATTG ATCGCAAACG TTTGCACCAA GCGATTGCCC ACAACCGCAG CCGCTGGTAT GAAACGCAGT TAGTCCGTAC GCCAAGCATC ATTTGTCAGC CGCAAGATCT ATTCGGCCAT CGAGTGCACT GGTGCAATCC CAACTTCATC ACTCGAAGTG CCACTCATGC GCGGGTGGCC CATGTGCTTC CAGGGCAATT GGCACCGGAC ATAGAGGGTT GCATTGTCTT AATCGAAAAC GCTGATCCGG GTTTTGATTG GATTTTTACC CACCGCATTG CTGGTTTCAT CACCGCCTAC GGAGGCGAGA ACTCGCATAT GTCGATCCGA GCCCGAGAGT TCGCCATTCC CGCAGCTATC GGCGTGGGCG ATACTCGATT CAAAACCCTA TTGGCGGCGA CAAGCCTGCT GCTCGACTGC GCCGAGCGGC GTATACAGGT GCTGGCATGA
|
Protein sequence | MNELRQLTEH IISPSGPFFS DLTRLPSITD KVQSLMARQP RGESLQRMRN ALSAANVVAE VFAGAARAAF VGTAIIKSLE TAGVVSAGFI DHVTGGVNSI GREMASDFQT LHKDDFLKLH GHVRPGTYDI RVARYDETPE SYFDWQRPLQ RPPKSTNGLT VSRAQVNAMQ QAFDQCGLNV SAEQFLQFAQ AAIASREKLK YLYAAFVSDV LRSLCDWGEV HGLDRDQLSF AQITDFTRGY ADIDRKRLHQ AIAHNRSRWY ETQLVRTPSI ICQPQDLFGH RVHWCNPNFI TRSATHARVA HVLPGQLAPD IEGCIVLIEN ADPGFDWIFT HRIAGFITAY GGENSHMSIR AREFAIPAAI GVGDTRFKTL LAATSLLLDC AERRIQVLA
|
| |