Gene PP_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0726 
Symbol 
ID1044559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp843516 
End bp844241 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content56% 
IMG OID637144120 
Producttransferase, putative 
Protein accessionNP_742887 
Protein GI26987462 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG TCATTCTTGC TGCTGGTCGC GGGAGCCGCT TACAAGCCCT GACCGATGAA 
CGCCCCAAGG CCTTGGTACC CTTTAACGGT GTGCCACTGC TACAGCGCGC GATTGAAACG
CTCCGTCGAT GCGATGTCAG CGAGGTTGGC ATCGTTGCAG GCTATCGAAG CGAAATGCTT
GCACCATTCG CCGACACTTT GTTTTACAAC CACCGCTGGC ACAGCTCCGG TATTTTCAGC
TCTCTAAATT GCGCCAGCGA TTGGTTGAGC GCAGAGCCTT GCCTTGTTAG CTACGGTGAC
ATCTTCTACG ACAGCACCCT AGTATCCGAG CTAATTAACC ATCCAGCCGA TATTGTCCTG
GGCTACGATC CCGCTGCAGT GCGTCTCTGG CAGCAACGCT TCAACGATCC GCTACCAGAT
CTGGAGAACT TCCGCTTAGT CGATGGATGG GTGAGCGCTA TTGGACAGAC CGCTACCAGT
CTTGAAGTCA TTCAGGGCCA GTACATGGGC TTGTTCAAAG TCACGCCAGC GGGTTGGCAG
GCGTTGAAAA AGCAATTGCA AGGGCTCACG CCTCAGGCAC GCGACCAAAC TGACATGACA
TCGCTTTTAG GGACACTCGT CAGCGAAGGT TTTCCAGTCG CCGGCGTGGC GACGCACGCT
CCCTGGGGAG AAATTGACTG CCCCAGCGAC GTGGCACTAT ACGAGCGGAT CTATCCTGAC
CGGTGA
 
Protein sequence
MKAVILAAGR GSRLQALTDE RPKALVPFNG VPLLQRAIET LRRCDVSEVG IVAGYRSEML 
APFADTLFYN HRWHSSGIFS SLNCASDWLS AEPCLVSYGD IFYDSTLVSE LINHPADIVL
GYDPAAVRLW QQRFNDPLPD LENFRLVDGW VSAIGQTATS LEVIQGQYMG LFKVTPAGWQ
ALKKQLQGLT PQARDQTDMT SLLGTLVSEG FPVAGVATHA PWGEIDCPSD VALYERIYPD
R