| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0715 |
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| Symbol | |
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| ID | 1044546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 830725 |
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| End bp | 832239 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637144108 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | NP_742876 |
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| Protein GI | 26987451 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.871689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACC GCTGCTATGG CCTGGGGCTG CTGATGGTGC TGGCCGGTTG CACTCAGGTT
GGTCCGGATT TCGAGAAGCC CCAAGCGCCG TGGCTGGACG GTTGGAGCAC GCCCATGATC
GAGCAGGCAG GGCGCAGCGC GGCGGCGCCC GACCTGCGTC AGTGGTGGGC GGTGTTTGCC
GACTCGACCC TGGACGCGCT GATAGCCGAG GCCGATGCCA ACAACACCAA CCTGCGCGTG
GCTGGCCTGC GTATCGCTGA AGCCCGTGCC CAGTTGGCCA TCGTGCAGAC CGGGCGTTAT
CCGCAGCTGC AGCAACTGAG TGCGCAAAGC CTGTACCTGA AGCAGGATCA GTCTGGTACG
CCTTCGGCCC GTGATTCGGT GTTCTGGCAA TCCAGCGTGG GCTTCGACAT CGGCTGGGAA
ATTGACTTCT GGGGCCGCTT CAGTCGCGCC ATCGAAAGCG CCGATGCCGT CTACTTCGCC
TCCCAGGCCA ACTACGCCGA TGCCATGCTG CTGCTGCGTG CGCAAGTGGC CGACACCTAC
TTTGCCCTGC GTACCGCCGA AGCGCGGCTG GCGATCGCAC AAGAGAACGC CAAGCGCCAG
GCGCGTAGCC TGGAGATTAC CGAGCGGTTG TTCCGCCACG GCGAAAACGA CGAGCTCGAC
TGGCAGCAGG CGCGTACTCA ATACCTGGCG ACCCTGGCCA CCATTCCCGA GTTCGAGAAC
CAGCTCAACG CCCTGCGCAA CATACTGTGC TCGCTGCTTG GCCGCCCGCC CGGGCCGCTG
CCGCAGCTGG AGGCCGGGCA TGGCCAACTG CCCTTGCCCA ACCGGGCAGT GTTGCAGGAT
GTACCTGCCA GCCTGCTGCA GCGCCGCCCG GACATCCGCG CCGCCGAGCA GGCAGTGGCG
GCGCAGTCGG CGCTGGTCGG GGTGGCCGAG GCCGATCTTT ATCCACAGCT GAGCTTGCTC
GGCAGTATCG GCTGGACCTT CCTATCGGCC AATCATCTGC CCGACACCTT CGACCTGGCG
GCTGGCCCAA GCCTGATCTG GAACCCGTTC GACTATGGCC GGCGCAAGAA CACCGTACGT
GTGGAAGATG CTCGGTTACA GCAACTGATC GAGTTGTACC AGCAGGGCGT GCGCGAAGCC
GCCCGTGAGG CCGACGATGC TGCCAGCGGG CTGGTGCGCT CGCTGCAGAG TGCAACCATT
CGCGAGCAGG CCTCTCAGGC TGCACAGCGC TCGCTGAATC TGGCCAGCTC GCAGTATCGC
GAAGGCTTCG CCGATTTTCA GCGGGTGCTC GATGCTCAGC AACTGCTGTT GCAGCAACAG
GACGGCTACC TGGTCAGCCG TGGCAACGCG GTCAGCAGCC TGGTGACGTT GTACAAGGCC
CTGGGCGGTG GTTGGGACGC CAGCCGCGCG CCGATCGACC CGGCCACCCG CCAGCAAATG
CAGCAACGCA CCGACTGGGG CGAGTTGCTC GACGAGCCAG CCCCCACCGC GCATGCACAA
GGTGAAACCG AATGA
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| Protein sequence | MPNRCYGLGL LMVLAGCTQV GPDFEKPQAP WLDGWSTPMI EQAGRSAAAP DLRQWWAVFA
DSTLDALIAE ADANNTNLRV AGLRIAEARA QLAIVQTGRY PQLQQLSAQS LYLKQDQSGT
PSARDSVFWQ SSVGFDIGWE IDFWGRFSRA IESADAVYFA SQANYADAML LLRAQVADTY
FALRTAEARL AIAQENAKRQ ARSLEITERL FRHGENDELD WQQARTQYLA TLATIPEFEN
QLNALRNILC SLLGRPPGPL PQLEAGHGQL PLPNRAVLQD VPASLLQRRP DIRAAEQAVA
AQSALVGVAE ADLYPQLSLL GSIGWTFLSA NHLPDTFDLA AGPSLIWNPF DYGRRKNTVR
VEDARLQQLI ELYQQGVREA AREADDAASG LVRSLQSATI REQASQAAQR SLNLASSQYR
EGFADFQRVL DAQQLLLQQQ DGYLVSRGNA VSSLVTLYKA LGGGWDASRA PIDPATRQQM
QQRTDWGELL DEPAPTAHAQ GETE
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