| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0687 |
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| Symbol | ispB |
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| ID | 1044514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 799502 |
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| End bp | 800470 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637144079 |
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| Product | polyprenyl synthetase |
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| Protein accession | NP_742848 |
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| Protein GI | 26987423 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.573498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCC AAACCTTCTA CCGCGCGGTG GCTGATGATT TCAGCGCCGT CGACGAGATC
ATCAAGAAGC AGCTGACCTC GCGCGTGCCG CTGGTATCGA AGATCGGCGA CTATATCACG
TCCGCCGGTG GCAAGCGCCT GCGTCCCCTG CTGGTACTGC TTTGTGGCAA GGCCCTGGGC
CGCGAAGGCG ACGACCTGCG CCTGCTGGCC GCCACCATCG AATTCCTGCA CACCGCCACC
CTGCTGCACG ACGACGTGGT CGACATGTCC GGCATGCGCC GTGGCCGCTC TACCGCCAAT
GCCCTGTGGG GCAACGCGCC GAGCGTACTG GTGGGCGACT TCCTTTATTC GCGCTCGTTC
GAAATGATGG TCGAGCTGGG CTCGATGCCG GTCATGCAGA TCCTGTCCAA GGCCACCCGG
GTGATTGCCG AAGGTGAAGT GCTGCAACTG TCGCGCGTAC GCGACGCCAG CACCACCGAG
GAAGTCTACA TGGAGGTCAT TCGCGGCAAG ACGGCGATGC TGTTCGAAGC TTCTACCCAC
AGTGCTGCGG CGCTGGCCCA GGCCACCGAC GAGCAGCGCG AAGCCCTGCG TACCTTTGGC
GACCATCTGG GCGTGGCCTT CCAGCTGGTC GACGACCTGC TGGACTACAA GGGTGACTCG
CAGACCCTGG GCAAGAACGT CGGTGACGAC CTGGCCGAGG GCAAACCTAC CCTGCCGCTG
ATCTACACCA TGCGCGAAGG CACTGCCGAG CAGGCGGCGC TGGTACGCCA GGCGATCCAG
AAGGGTGGCC TGGAAGATCT GGAACAGATT CGCGTTGCGG TCGAAGAATC GGGCGCACTG
AAATACACCG CCGAGCTGGC GCGCGATTAC GTGAAACGCG CCATCGCCTG CCTCGAAGTG
CTGCCTGCCA GTGAATACCG GGATGCGCTG GTTGAACTGA GCGAGTTTGC GGTCGCGCGT
ACGCACTGA
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| Protein sequence | MQPQTFYRAV ADDFSAVDEI IKKQLTSRVP LVSKIGDYIT SAGGKRLRPL LVLLCGKALG
REGDDLRLLA ATIEFLHTAT LLHDDVVDMS GMRRGRSTAN ALWGNAPSVL VGDFLYSRSF
EMMVELGSMP VMQILSKATR VIAEGEVLQL SRVRDASTTE EVYMEVIRGK TAMLFEASTH
SAAALAQATD EQREALRTFG DHLGVAFQLV DDLLDYKGDS QTLGKNVGDD LAEGKPTLPL
IYTMREGTAE QAALVRQAIQ KGGLEDLEQI RVAVEESGAL KYTAELARDY VKRAIACLEV
LPASEYRDAL VELSEFAVAR TH
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