Gene PP_0634 details

Gene Information

• Locus tag: PP_0634
• Symbol: pilA
• ID: 1044453
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: +
• Start bp: 740841
• End bp: 741251
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637144025
• Product: fimbrial protein pilin
• Protein accession: NP_742795
• Protein GI: 26987370
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4969] Tfp pilus assembly protein, major pilin PilA
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAGGGC AACGCGGTAT CACCCTGATC GAACTGATGA TCGTCGTCGC GATCATCGGC 
ATTCTGGCGA CCATCGCCTT ACCGATGTAC ACCAACCACC AGGCACGCTC CAAGGCCGCG 
GCCGGGTTGC TGGAGATCAG CGCCCTGAAG ACGGCGATGG ATCTGCGGCT GAATGATGGG 
AAGGATGTAG CGGATGTAGC CGCCCTGGGT GGCCAGCCAG CGACGGCGCA TTGTGCGATC 
ACGGCCAGCG GCAAGGCCGC AGATGGCAGC GGCAGCATTG TCTGCACCCT GGTGGATGCG 
CCTGCCAACG CGCTGGGCAA GGCCCTGACC CTGACGCGTT CGACCAGCGG CTGGGCGTGC 
ACGACCGACA TCGAGGACGA CCTGGCGCCC AAAGGGTGCA AGGGGGCTTG A 

 

Protein sequence

MKGQRGITLI ELMIVVAIIG ILATIALPMY TNHQARSKAA AGLLEISALK TAMDLRLNDG 
KDVADVAALG GQPATAHCAI TASGKAADGS GSIVCTLVDA PANALGKALT LTRSTSGWAC 
TTDIEDDLAP KGCKGA