Gene PP_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0604 
SymbollspA 
ID1044418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp713010 
End bp713540 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content63% 
IMG OID637143991 
Productlipoprotein signal peptidase 
Protein accessionNP_742766 
Protein GI26987341 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.975545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTGCG CCACTATGCC TAACCCTGCA GCGGGGCGCT TCGGGCGCCT TGCATGGCTG 
TGGCTGAGCT TGCTGGTCCT GGTCATCGAC CAGGCCACCA AGCTGTACTT CAACAACGCC
CTGACCATGT ACCAGCAGAT CGTGGTCATT CCTGACTACT TCAGCTGGAC CCTGGCTTAC
AACACCGGTG CCGCGTTCAG CTTCCTGGCT GACGGAGCGG GTTGGCAGCG CTGGTTGTTC
GCCCTGATCG CCGTGGTGGT CAGCGCGGTA CTGGTCGTCT GGCTCAAGCG CCTGGGGCGC
AACGAGACCT GGCTGGCCGT GGCGCTGGCG CTGGTGCTGG GTGGGGCGAT TGGCAACCTG
TACGACCGCA TCGTGCTGGG CCATGTGGTC GACTTCATCC TGGTGCACTG GCAGAACCGC
CATTACTTCC CGGCCTTCAA CGTGGCCGAC AGCGCCATCA CCGTTGGTGC GGTGATGCTG
GCGCTGGATA TGTTCAAGAG CAAGAAGTCC GAGGATCCGG TCCATGACTG A
 
Protein sequence
MRCATMPNPA AGRFGRLAWL WLSLLVLVID QATKLYFNNA LTMYQQIVVI PDYFSWTLAY 
NTGAAFSFLA DGAGWQRWLF ALIAVVVSAV LVVWLKRLGR NETWLAVALA LVLGGAIGNL
YDRIVLGHVV DFILVHWQNR HYFPAFNVAD SAITVGAVML ALDMFKSKKS EDPVHD