Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0604 |
Symbol | lspA |
ID | 1044418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 713010 |
End bp | 713540 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143991 |
Product | lipoprotein signal peptidase |
Protein accession | NP_742766 |
Protein GI | 26987341 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.975545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGTGCG CCACTATGCC TAACCCTGCA GCGGGGCGCT TCGGGCGCCT TGCATGGCTG TGGCTGAGCT TGCTGGTCCT GGTCATCGAC CAGGCCACCA AGCTGTACTT CAACAACGCC CTGACCATGT ACCAGCAGAT CGTGGTCATT CCTGACTACT TCAGCTGGAC CCTGGCTTAC AACACCGGTG CCGCGTTCAG CTTCCTGGCT GACGGAGCGG GTTGGCAGCG CTGGTTGTTC GCCCTGATCG CCGTGGTGGT CAGCGCGGTA CTGGTCGTCT GGCTCAAGCG CCTGGGGCGC AACGAGACCT GGCTGGCCGT GGCGCTGGCG CTGGTGCTGG GTGGGGCGAT TGGCAACCTG TACGACCGCA TCGTGCTGGG CCATGTGGTC GACTTCATCC TGGTGCACTG GCAGAACCGC CATTACTTCC CGGCCTTCAA CGTGGCCGAC AGCGCCATCA CCGTTGGTGC GGTGATGCTG GCGCTGGATA TGTTCAAGAG CAAGAAGTCC GAGGATCCGG TCCATGACTG A
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Protein sequence | MRCATMPNPA AGRFGRLAWL WLSLLVLVID QATKLYFNNA LTMYQQIVVI PDYFSWTLAY NTGAAFSFLA DGAGWQRWLF ALIAVVVSAV LVVWLKRLGR NETWLAVALA LVLGGAIGNL YDRIVLGHVV DFILVHWQNR HYFPAFNVAD SAITVGAVML ALDMFKSKKS EDPVHD
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