Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0589 |
Symbol | |
ID | 1044400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 687134 |
End bp | 688315 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637143972 |
Product | Bcr/CflA family multidrug resistance transporter |
Protein accession | NP_742752 |
Protein GI | 26987327 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGC GAATGGTGCT CATCCTGGGC GCACTCAGTG CGTTCGGGCC CTTGGCGATC GACTTCTACC TGCCAGCCTT TCCGGCCATG GCGCAAGCGT TCGCCACCGA TGAAAAACAC GTCCAGGCCA CGTTGGCCGC CTACTTCCTG GGCCTGTCTA TCGGGCAGTT GGCCTATGGG CCGGTTGCCG ACCGCTTTGG CCGACGCAAA CCGCTGATGT TCGGCGTTAC GCTGTTCACC CTGGCATCAC TGGCCTGTGC CTACGCCCCC AACCTCGATA CCTTGGTGGT GGCGCGCTTC ATCCAGGCAC TGGGTGGTTG TGCCGGCATG GTGCTTTCGC GGGCCATCGT CAGCGACAAG TGCGACCCGG TAGCTTCAGC CAAAGTGTTT TCGCAACTGA TGCTGGTCAT GGGCTTGGCG CCGATCCTGG CACCGATGTT GGGTGGGGTG CTGGTGAACC TGGCCGGCTG GCAGTCGATC TTCCTTGCGC TGAGCCTGTT CAGTGCCGGC TGCCTGCTTG CGGTAAGCCT GGGCCTGCCG GAAAGCCTGC CCGAGCATAT ACCCCGCCAA CCGCTGTCTG GCGCCTTGCG CCAGTACCTG CGGCTGCTGG CTGACCGGGT TTTTCTCGGC CATGCCCTGA CCGGCGGTAT CGCCATTGCC GGCATGTTCG CCTATATCGC CGGTTCACCT TTCGTGTTCA TCAAACTGTA TGGCGTGCCC GCTGAGCACT ACGGCTGGCT GTTCGGTACC AACGCCGCAG GTTTTATTCT GGTGGCGCAG GTGAACGCCC GCCTGCTGGC CAAACGCGGG CCGGCCTTCC TGCTGGGCCG TGCGGTGTGG CTGTATCTGG TTGCGGGCCT GGTGCTGCTG GGCGTGGCGG CGTTGCGCCC TGCGCAATTG TGGCCGCTAC TGGTGCCGCT GTTCATCTGT ATCGCCAGCC TTGGTTGCAT CATTCCCAAT GCTTCGGCCT GCGCCATGAG TGGACAGGGC GCGCGTGCCG GCAGCGCCTC GGCACTGATG GGCTGCGTGC AGTTCAGCGT AGCTGCGGGT GCTGCGGCGC TGGTCGGGCT ACTGCATGAT GGCAGTGCGG TGCCCATGGC AATCGTGATC AGCCTGTGCG GGGCGCTGGT GGTCAGTGTT GCGCTGTTGA CCCGGCGTTT GCAGGCCAAG GCTCCCGCAT AA
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Protein sequence | MNLRMVLILG ALSAFGPLAI DFYLPAFPAM AQAFATDEKH VQATLAAYFL GLSIGQLAYG PVADRFGRRK PLMFGVTLFT LASLACAYAP NLDTLVVARF IQALGGCAGM VLSRAIVSDK CDPVASAKVF SQLMLVMGLA PILAPMLGGV LVNLAGWQSI FLALSLFSAG CLLAVSLGLP ESLPEHIPRQ PLSGALRQYL RLLADRVFLG HALTGGIAIA GMFAYIAGSP FVFIKLYGVP AEHYGWLFGT NAAGFILVAQ VNARLLAKRG PAFLLGRAVW LYLVAGLVLL GVAALRPAQL WPLLVPLFIC IASLGCIIPN ASACAMSGQG ARAGSASALM GCVQFSVAAG AAALVGLLHD GSAVPMAIVI SLCGALVVSV ALLTRRLQAK APA
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