Gene PP_0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0589 
Symbol 
ID1044400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp687134 
End bp688315 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content64% 
IMG OID637143972 
ProductBcr/CflA family multidrug resistance transporter 
Protein accessionNP_742752 
Protein GI26987327 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC GAATGGTGCT CATCCTGGGC GCACTCAGTG CGTTCGGGCC CTTGGCGATC 
GACTTCTACC TGCCAGCCTT TCCGGCCATG GCGCAAGCGT TCGCCACCGA TGAAAAACAC
GTCCAGGCCA CGTTGGCCGC CTACTTCCTG GGCCTGTCTA TCGGGCAGTT GGCCTATGGG
CCGGTTGCCG ACCGCTTTGG CCGACGCAAA CCGCTGATGT TCGGCGTTAC GCTGTTCACC
CTGGCATCAC TGGCCTGTGC CTACGCCCCC AACCTCGATA CCTTGGTGGT GGCGCGCTTC
ATCCAGGCAC TGGGTGGTTG TGCCGGCATG GTGCTTTCGC GGGCCATCGT CAGCGACAAG
TGCGACCCGG TAGCTTCAGC CAAAGTGTTT TCGCAACTGA TGCTGGTCAT GGGCTTGGCG
CCGATCCTGG CACCGATGTT GGGTGGGGTG CTGGTGAACC TGGCCGGCTG GCAGTCGATC
TTCCTTGCGC TGAGCCTGTT CAGTGCCGGC TGCCTGCTTG CGGTAAGCCT GGGCCTGCCG
GAAAGCCTGC CCGAGCATAT ACCCCGCCAA CCGCTGTCTG GCGCCTTGCG CCAGTACCTG
CGGCTGCTGG CTGACCGGGT TTTTCTCGGC CATGCCCTGA CCGGCGGTAT CGCCATTGCC
GGCATGTTCG CCTATATCGC CGGTTCACCT TTCGTGTTCA TCAAACTGTA TGGCGTGCCC
GCTGAGCACT ACGGCTGGCT GTTCGGTACC AACGCCGCAG GTTTTATTCT GGTGGCGCAG
GTGAACGCCC GCCTGCTGGC CAAACGCGGG CCGGCCTTCC TGCTGGGCCG TGCGGTGTGG
CTGTATCTGG TTGCGGGCCT GGTGCTGCTG GGCGTGGCGG CGTTGCGCCC TGCGCAATTG
TGGCCGCTAC TGGTGCCGCT GTTCATCTGT ATCGCCAGCC TTGGTTGCAT CATTCCCAAT
GCTTCGGCCT GCGCCATGAG TGGACAGGGC GCGCGTGCCG GCAGCGCCTC GGCACTGATG
GGCTGCGTGC AGTTCAGCGT AGCTGCGGGT GCTGCGGCGC TGGTCGGGCT ACTGCATGAT
GGCAGTGCGG TGCCCATGGC AATCGTGATC AGCCTGTGCG GGGCGCTGGT GGTCAGTGTT
GCGCTGTTGA CCCGGCGTTT GCAGGCCAAG GCTCCCGCAT AA
 
Protein sequence
MNLRMVLILG ALSAFGPLAI DFYLPAFPAM AQAFATDEKH VQATLAAYFL GLSIGQLAYG 
PVADRFGRRK PLMFGVTLFT LASLACAYAP NLDTLVVARF IQALGGCAGM VLSRAIVSDK
CDPVASAKVF SQLMLVMGLA PILAPMLGGV LVNLAGWQSI FLALSLFSAG CLLAVSLGLP
ESLPEHIPRQ PLSGALRQYL RLLADRVFLG HALTGGIAIA GMFAYIAGSP FVFIKLYGVP
AEHYGWLFGT NAAGFILVAQ VNARLLAKRG PAFLLGRAVW LYLVAGLVLL GVAALRPAQL
WPLLVPLFIC IASLGCIIPN ASACAMSGQG ARAGSASALM GCVQFSVAAG AAALVGLLHD
GSAVPMAIVI SLCGALVVSV ALLTRRLQAK APA