Gene PP_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0580 
Symbol 
ID1044380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp676788 
End bp677639 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content64% 
IMG OID637143963 
ProductMaoC domain-containing protein 
Protein accessionNP_742743 
Protein GI26987318 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.648773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAC AATGGCACGA CCTGCACAAC CCTGCCGCCC GCGCCAGCCT GTACCTGCGC 
GCAGCCAGCA AACGCTCCAT CAGCGGCGAA CGGCTGCCGG ACGATGGCCT GCGCTGTTTC
ATTCGGGTCC AGCCGGGCAA TCTGGGTGCC TACCGAAGGC TTTGCCACTT TCCCGATGAT
GGCCGCCTGC CGGGGACCTA TCCACATGTG ATGGCGTTCG CCCTGCAATT GCAGCTGATG
ACGGCCGATG ATTTCCCCTT CCCGCTGCTT GGCCTGGTAC ACCTGCACAA CCGCATCGAA
GTGCTGCGCC CGCTTGGTGC TGTCGAAGGA CTGCGCTTTG CGGTGTACAC GCACAACCTG
CAGCGCCATG CCAAAGGTGG CACCTTCGAC CTGGTCACCG AGGCTGAAGA TGGTATCGGC
CTGCTCTGGC GCGAAACCAG CCGCATGTTG GTGCGTGGCT TGGCCCTGGA AGGCGAGGCA
AGTGAGCCCG CCGACCCTGA GCCTGATCCG TTGGCCGAGG CCACCCGCTG GTACGCCGAC
AGTGATATCG GCCGGCGTTA TGCCAAGGTG TGCGGGGATT ACAACCCTAT CCATCTCAGT
GCCGTCAGTG CGCGGTTGTT CGGCTTTCCC ACGGCCATTG CCCATGGCAT GTGGACCAAG
GCCATGGCCT TGGCCGCGCT GCGCGGGCAC TTGCCGCACA GTGGCTATGC CTTTGAGGTG
GACTTCCGCA AGCCGGTGAG GTTGCCTTCG GAGGTGGTGC TCAGTGCCAG TGAAGCGGGC
CCTTCGGGCC AACTGCGCCT GGACGGGCAC GGGGACGTGC TGCATATGGT CGGCCGTTGG
GAGAGCCTGT AG
 
Protein sequence
MSRQWHDLHN PAARASLYLR AASKRSISGE RLPDDGLRCF IRVQPGNLGA YRRLCHFPDD 
GRLPGTYPHV MAFALQLQLM TADDFPFPLL GLVHLHNRIE VLRPLGAVEG LRFAVYTHNL
QRHAKGGTFD LVTEAEDGIG LLWRETSRML VRGLALEGEA SEPADPEPDP LAEATRWYAD
SDIGRRYAKV CGDYNPIHLS AVSARLFGFP TAIAHGMWTK AMALAALRGH LPHSGYAFEV
DFRKPVRLPS EVVLSASEAG PSGQLRLDGH GDVLHMVGRW ESL