| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0569 |
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| Symbol | |
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| ID | 1044359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 661615 |
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| End bp | 662952 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637143952 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_742732 |
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| Protein GI | 26987307 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.163672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAC TCGCTGCCGA CTGGCGCCAC CGCCCCACCC ACCGCAAGGT CTGGGCGCTG
GCCGCGCCGA TGATCCTGTC CAACATTTCG GTACCGCTGG TGGCGCTGGT CGACAGCACG
GTCATCGGTC ATCTCCCGCA CGCCCACCAA CTGGGCGCCG TGGCCGTGGG CGCCACCTTG
TTCACCTTCA TGGTCGGCCT GATGGGCTTC CTGCGCATGG GGTCCACCGG CTTCGCTGCC
CAGGCCGCCG GCCGTGGCGA CGGTGCAGCG CTACGCCAGG TCCTGGTGCA AGGGCTGCTG
CTGGCGGTCG GCTTCGCCCT GTTGATCGGC CTGCTGGCCC TGCCCTTCAG CCAGCTGGCA
CTCCATGCGA TGCAACCCAG CGCAGCCCTG CAGCAATCCA CCGAAGACTT CTTCCACACC
CGCCTGCTTG GCCTGCCTGC GGCGCTGGCC AGTTACGCGC TGGTCGGCTG GTTCCTCGGC
ACGCAGAACG CCAGGGCTCC ACTGGCCATC CTGCTGACCA CCAACCTGCT GAACATCGCC
TTGAACCTAT GGTTCGTGCT GGGCCTGGAC TGGGGTGTAC TGGGCTCGGC GCGGGCGTCG
GTAATTGCCG AATGGAGTGC CGCCCTGCTC GGCCTGGCCC TGACCCGCCC GGCTCTGCGG
GCATACCCGG GGCAGATCGT GTGGGCAGCG CTCAAGCGCT GGCAGGCCTG GAGGCCACTG
CTGGCGGTGA ACCGCGACAT CTTCCTGCGT AGCCTGGCAC TGCAACTGGT GTTCCTGCTG
ATTACCGTGC AGGGCGCGCG TCTGGGCGAA GCGACCGTGG CGGCCAACGC CCTGTTGCTC
AATGGCCTGC TGCTGACGGC CTATGCGCTG GATGGGCTGG CCCATGCGGT GGAGGCCTTG
TGCGGCCATG CCATTGGTGC CCGTGACCGC GACACCTTGC GCCGCTCGCT GGTGGTCGCT
TGTGGTTGGT CACTGATCAC CAGCCTGGGC TTTGCCGGGC TGTTCCTGCT GGGTGGGCAC
CTGTTCATCG ACTTGCAGAC CGACATCGAA AGTGTGCGGG CGGCGGCTTA TCCGTATTTG
CCCTACCTGG CGTTGCTGCC GCTGATCGCG GTGTGGAGTT ACTTGCTGGA TGGCTTGTTC
ATCGGCGCGA CCCGGGCGCG GGAAATGCGA AATGCAATGC TGGTTTCGGT GTTGATTGCG
CTGCCGGTGG CAGTGGCCAT GAGCGGGTTG GGCAACCATG GGTTGTGGAT GGCGTTTCTT
GGGTTCATGG GGTTGCGGGC GGTGACGTTG GGGTGGGTTG GGTGGCGGTT GCAGCAGAGA
GACCTGTGGT GTCGCTGA
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| Protein sequence | MPQLAADWRH RPTHRKVWAL AAPMILSNIS VPLVALVDST VIGHLPHAHQ LGAVAVGATL
FTFMVGLMGF LRMGSTGFAA QAAGRGDGAA LRQVLVQGLL LAVGFALLIG LLALPFSQLA
LHAMQPSAAL QQSTEDFFHT RLLGLPAALA SYALVGWFLG TQNARAPLAI LLTTNLLNIA
LNLWFVLGLD WGVLGSARAS VIAEWSAALL GLALTRPALR AYPGQIVWAA LKRWQAWRPL
LAVNRDIFLR SLALQLVFLL ITVQGARLGE ATVAANALLL NGLLLTAYAL DGLAHAVEAL
CGHAIGARDR DTLRRSLVVA CGWSLITSLG FAGLFLLGGH LFIDLQTDIE SVRAAAYPYL
PYLALLPLIA VWSYLLDGLF IGATRAREMR NAMLVSVLIA LPVAVAMSGL GNHGLWMAFL
GFMGLRAVTL GWVGWRLQQR DLWCR
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