Gene PP_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0565 
Symbol 
ID1044354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp657658 
End bp658191 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content64% 
IMG OID637143948 
ProductNUDIX hydrolase 
Protein accessionNP_742728 
Protein GI26987303 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA GCCCAACCGA GGCCGCCCAT CGGGCGGCTT CCGACCGCGA GCTGGTCACC 
TGGGTGGACG AAACCGACCA GGTACTGGGC GCCTTGCCCC GTGCCGAGCT GCGCGAGCGT
GGCCTGATCG GTCGTTGCAC GTTCATTCTG CTGTTCAACA GTGCCGGTGA ATTGTGTGTA
CACCGGCGTA CGCTGAGCAA GGCGCTGTAC CCCGGCTATT GGGATGTGGC AGCGGGCGGC
ATGGTCGCGG CTGGCGAAGC GTATGCCGAG TCGGCCGCGC GCGAGCTGGC CGAAGAGCTG
GGCATCGAGG GCGCCGAGCT GCGCTTTCAC GAGCGGTTCT ATTTCGACCA GCCGGATAAC
CGCTTGTGGT GCGCGGTGTA TTCGGCGGTG TCGGATGCGC CGTTGCGGTT GCAGCCGGAA
GAGGTTATTG AAGCGCGCTT CATCGGTCTG GAACAGGCTG AGCAGGAAAG CCTGAGCAAG
CCTTATTGCC CGGACTCGTT GGCGGCGTTG CAGCGCTACA AGGCCACTTT GTAG
 
Protein sequence
MAISPTEAAH RAASDRELVT WVDETDQVLG ALPRAELRER GLIGRCTFIL LFNSAGELCV 
HRRTLSKALY PGYWDVAAGG MVAAGEAYAE SAARELAEEL GIEGAELRFH ERFYFDQPDN
RLWCAVYSAV SDAPLRLQPE EVIEARFIGL EQAEQESLSK PYCPDSLAAL QRYKATL