Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0533 |
Symbol | pfeS |
ID | 1044309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 618667 |
End bp | 619995 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637143916 |
Product | sensor protein PfeS |
Protein accession | NP_742696 |
Protein GI | 26987271 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCC ACCCGTTGCT GTGGAAACTG GCCTTGCTGC AAGTCAGCTT CTGCCTGTTG CTGATCTGGC TCATCTGGAC CTGGGGCCTT TCGGTGGAAC GCAGTACCTA TTTTCTGTCC CAGGCTGACC AGGACTACCT GGCGCGTTAT GCTCAACAGG CCGAACAGGC GTGGGAGCAG GACGGCGCAG CCGGCACCGA GGCCTGGCGC AAGCATGTGG CACGGGCCGA GGACACCTGG GTGGCCGTGA TAGGTCCACA CCTTCAGAGC CTTGGCACCA CGCCGCTGAG CGCCGAGGAA GCCAGCCACC TGACATTCAT GCGCAAGCTC GACTGGCCGA TGAGCCGGCG CCTGCAGGAT GAACTGCCCT ACGTCAGCAT CGAATTTCCG CAACACCCCG AGCATGGCCG CCTGGTGCTG CAACTGCCCG AACGGCTGCT ACCGACAGGC CTGACACCCT GGACCCATGT GGTCACGCAT GGCGTTGCCC CCGCACTGCT GGCCCTGCTG CTAGGCCTTG CGCTATACCG GCATCTTGTC GTGCCGCTGA ACCGCCTGCG CGACCGCGCC GACGCCCTGC GGGCCGATGA TCTGGACAGC CCCGCCCTGC CCCTGCAGGA GCGGCGTGAT GAGCTGGGTG AGCTGGCTCA GGCCTTCGAG CACATGGCCG GGCGCCTGCG CCAGAGCCTT GAGCAACAGC GCCTGCTGTT GCGCACGCTG TCTCACGAAT TGCGCACGCC GCTGGCGCGG CTGCGCATCG CCCATGACAG CGACTTGCCA CCGCCGCAGC TGCGCGAGCG CCTGGACCGT GAGGTAGCCG ACATGCAGAA GCTGCTGGAA AACACCCTCG ACCTGGCCTG GATGGACACC GAACAGCCCA GCCTGGTGAC CGAGCCGGTA TTGGTGCTTT CCGTGTGGGA AGCCTTGTGC GAGGACGTCT GTTTCGAAAG CGGCTGGGAC CGTGCGCGCC TGCCGTGCTC ACTTGGCACC GACTGCCTGG TGCAGGCCCA TCTGGACAGC CTGGCCCAGG CCCTGGAAAA CCTGTTGCGC AATGCCATTC GCCACTCGCC GACCGAAGGC CGGGTCAGCC TTGATGGCTG GCGTGAGGGC GCATGCTGGC ACCTGCGCCT GAGCGACCAA GGGCCAGGCG TACCGGATAC CGACCTTGAG CGCATTTTCA AGCCCTACCA GCGCCTGGCC GAGAGTGGCG CAGGCTTCGG CCTGGGCCTT GCTATCGCCC GTCGCGCCAT CGAACTGCAA GGCGGCCGGT TGTGGGCCAG CAATGGGCAC CCGGGTCTGT GCCTGCACAT GACCTTGCCT GCGGCCTGA
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Protein sequence | MRRHPLLWKL ALLQVSFCLL LIWLIWTWGL SVERSTYFLS QADQDYLARY AQQAEQAWEQ DGAAGTEAWR KHVARAEDTW VAVIGPHLQS LGTTPLSAEE ASHLTFMRKL DWPMSRRLQD ELPYVSIEFP QHPEHGRLVL QLPERLLPTG LTPWTHVVTH GVAPALLALL LGLALYRHLV VPLNRLRDRA DALRADDLDS PALPLQERRD ELGELAQAFE HMAGRLRQSL EQQRLLLRTL SHELRTPLAR LRIAHDSDLP PPQLRERLDR EVADMQKLLE NTLDLAWMDT EQPSLVTEPV LVLSVWEALC EDVCFESGWD RARLPCSLGT DCLVQAHLDS LAQALENLLR NAIRHSPTEG RVSLDGWREG ACWHLRLSDQ GPGVPDTDLE RIFKPYQRLA ESGAGFGLGL AIARRAIELQ GGRLWASNGH PGLCLHMTLP AA
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