Gene PP_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0528 
SymbolispA 
ID1044304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp614357 
End bp615244 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content65% 
IMG OID637143911 
Productpolyprenyl synthetase 
Protein accessionNP_742691 
Protein GI26987266 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGCA CCTACCAGGC CAGTTGCCAG GCGCGCGTCG ACGCAGCCCT CGAACCGCTG 
TTCATCGCCC CGAGCAAAGA GCTGGAACGC CTTTACGCCG CCATGCGCTA CAGCGTGATG
AACGGCGGCA AACGCGTGCG CCCGTTGCTG GCCTACGCGG CCTGCGAAGC CTTGGGCGCC
CCGGCCGAAC AGGCCAACGG TGCAGCCTGC GCGGTCGAGC TGATCCATGC TTACTCGCTG
GTGCATGACG ACCTCCCGGC CATGGACGAC GACGACCTGC GTCGCGGCCA GCCGACCACC
CACAAGGCGT TTGACGAAGC GTGCGCCATC CTTGCTGGCG ACGGTTTGCA GAGCCTGGCT
TTCAGTGCCC TGCTCGACCC TTGCCTGAGC CCTCAGATCG ACAGCATTCG CCTGGCCATG
GTTCAGGTGC TGGCCAAAGC TGCCGGCCCG GCCGGCATGG TTGGCGGCCA GGCCATCGAT
CTCGGTTCGG TGGGCCAGAA GCTGGACCAG CAGGCGCTGG AGTTCATGCA CCGGCACAAG
ACCGGCGCGC TGATCGAAGC CAGCGTACGC CTCGGCGCCC TGGCAAGTGC CCGTGCCGAA
CCGGTGCAGC TGGATGCCCT GCAAACTTAT GCACAGGCCA TTGGCCTGGC ATTCCAGGTG
CAGGACGACA TCCTCGACGT GGAAAGCGAC ACTGCTACCT TGGGCAAACG CCAAGGTGCA
GACATAGCGC GTGACAAACC GACCTACCCG GCCCTGCTGG GCCTGGAAGC CGCCAAAGCC
TATGCAATCG AACTGCGCGA CCAGGCGCTG GCCGCACTGC AAGGGTTCGG CGAAAAGGCC
GAGCCGCTGC GGGCCTTGGC GCGTTATATT GTCGAACGCC GTAACTAA
 
Protein sequence
MIGTYQASCQ ARVDAALEPL FIAPSKELER LYAAMRYSVM NGGKRVRPLL AYAACEALGA 
PAEQANGAAC AVELIHAYSL VHDDLPAMDD DDLRRGQPTT HKAFDEACAI LAGDGLQSLA
FSALLDPCLS PQIDSIRLAM VQVLAKAAGP AGMVGGQAID LGSVGQKLDQ QALEFMHRHK
TGALIEASVR LGALASARAE PVQLDALQTY AQAIGLAFQV QDDILDVESD TATLGKRQGA
DIARDKPTYP ALLGLEAAKA YAIELRDQAL AALQGFGEKA EPLRALARYI VERRN