Gene PP_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0519 
SymbolthiL 
ID1044294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp604686 
End bp605654 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content67% 
IMG OID637143902 
Productthiamine monophosphate kinase 
Protein accessionNP_742682 
Protein GI26987257 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAGT TCGAGCTGAT CAACCATTAC TTCGCCGCAG CGCCCTGTGC GCAGGGCGGC 
GAGGGCGTGG CGCTGGGTAT CGGCGACGAC TGCGCCCTGC TGGACCTTCC CCCCGGTGAG
CAACTGGCGG TGTCGACCGA CACCCTGGTC GCCGGGGTGC ACTTTCCTGC TGTTTGCGAT
CCGTTGCTGC TTGGCCAGCG TTCGTTGGCT GTGGCGGCCA GTGACCTGGC AGCCATGGGC
GCGACTGCAA TCGGCTTCAC CCTCGCACTG ACCCTGCCTG ACGTTGGCCC TGACTGGCTG
GCGGCCTATG CCGACGGCCT TGGTCGCATG GCCCACCGTT GCCGCATGAG CCTGATCGGT
GGTGACACCA CGCGCGGCCC GTTGAGCATC ACCGTGACCG TGTTCGGCCG CGTGCCGGCT
GGCCAGGCCT TGCGCCGCAG CGGTGCAAGG CCGGGTGATC TGTTGTGTGT CGGTGGTTCG
CTGGGCAAGG CCGCCGGTGC CTTGCCGCTG GTGCTGGGTG AGCGCGAGGC GCCTGCCGCG
CAGGCCGAGC CGCTGCTGGC TCATTACTGG TCACCGATGC CGCAGCTCAC CCTCGGGGCT
CTGCTGCGTG GCAAGGCCAC TGCGGCCCTG GACATTTCCG ATGGCCTGCT CGCTGACTGC
GGGCATATCG CCAAGGCCTC CGGCGTGGCG CTGGAGGTGA ACCTGGCGCA GGTGCCAGTG
TCTCCTGCCT TAGAGGCATT CCTCGGGCGC GAAGCGGCGT TGCAGGCAGC ACTCACCGGT
GGCGACGACT ATGTACTGGC CTTCACCTTG CCGCCCGAAG CGCTGGCGCC CCTGGCTGGC
CTCGGTTGCA TCGAGGTACA TATCATTGGT CGTGTGCTCG AAGGGCAGGG TGTGACCTTG
CGCGACTCAC AGGGCCAGGA CATAACCCCC GTCCAGCGGG GCTATCAACA CTTTAGGGAG
AGACCGTGA
 
Protein sequence
MGEFELINHY FAAAPCAQGG EGVALGIGDD CALLDLPPGE QLAVSTDTLV AGVHFPAVCD 
PLLLGQRSLA VAASDLAAMG ATAIGFTLAL TLPDVGPDWL AAYADGLGRM AHRCRMSLIG
GDTTRGPLSI TVTVFGRVPA GQALRRSGAR PGDLLCVGGS LGKAAGALPL VLGEREAPAA
QAEPLLAHYW SPMPQLTLGA LLRGKATAAL DISDGLLADC GHIAKASGVA LEVNLAQVPV
SPALEAFLGR EAALQAALTG GDDYVLAFTL PPEALAPLAG LGCIEVHIIG RVLEGQGVTL
RDSQGQDITP VQRGYQHFRE RP